PlantSME Plant secondary metabolism enzyme database

Linum usitatissimum (linum_usitatissimum)

Imported from atlas release summary for Linum usitatissimum.

2937
Candidate Protein Records
2406
Pathway-Level Records
5978
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 720 20 BAHD (265) View species results
Alkaloid pathway 546 26 7DLGT (120) View species results
Phenylpropanoid pathway 492 12 POD (211) View species results
Flavonoid pathway 313 11 UFGT (198) View species results
Rosmarinic acid pathway 219 7 C4H (89) View species results
Steroid pathway 116 12 CAS (42) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2315 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Lusiscaffold4300272850.1 Flavonoid UFGT medium pass
Lusiscaffold4300272860.1 Flavonoid UFGT medium pass
Lusiscaffold4300272870.1 Flavonoid UFGT medium pass
Lusiscaffold4300272880.1 Flavonoid UFGT medium pass
Lusiscaffold4300272890.1 Flavonoid UFGT low borderline
Lusiscaffold4300272900.1 Flavonoid UFGT medium pass
Lusiscaffold4540278180.1 Flavonoid UFGT medium pass
Lusiscaffold4620283040.1 Flavonoid UFGT low borderline
Lusiscaffold4620283070.1 Flavonoid UFGT low borderline
Lusiscaffold4620284580.1 Flavonoid UFGT high pass
Lusiscaffold4640288150.1 Flavonoid UFGT high pass
Lusiscaffold4680290760.1 Flavonoid UFGT medium pass
Lusiscaffold4680290770.1 Flavonoid UFGT high pass
Lusiscaffold4720293150.1 Flavonoid UFGT high pass
Lusiscaffold4730294130.1 Flavonoid UFGT medium pass
Lusiscaffold4900303100.1 Flavonoid UFGT medium pass
Lusiscaffold5400315040.1 Flavonoid UFGT medium pass
Lusiscaffold5400315050.1 Flavonoid UFGT medium pass
Lusiscaffold5400315060.1 Flavonoid UFGT medium pass
Lusiscaffold5460317500.1 Flavonoid UFGT medium pass
Lusiscaffold550318040.1 Flavonoid UFGT high pass
Lusiscaffold550318050.1 Flavonoid UFGT high pass
Lusiscaffold550318180.1 Flavonoid UFGT high pass
Lusiscaffold5940330670.1 Flavonoid UFGT medium pass
Lusiscaffold6050333580.1 Flavonoid UFGT medium pass
Lusiscaffold6050333880.1 Flavonoid UFGT medium pass
Lusiscaffold6050335010.1 Flavonoid UFGT high pass
Lusiscaffold610336420.1 Flavonoid UFGT high pass
Lusiscaffold6120337540.1 Flavonoid UFGT medium pass
Lusiscaffold6120337550.1 Flavonoid UFGT high pass
Lusiscaffold6510348790.1 Flavonoid UFGT medium pass
Lusiscaffold6510348800.1 Flavonoid UFGT medium pass
Lusiscaffold6540349690.1 Flavonoid UFGT medium pass
Lusiscaffold6540349730.1 Flavonoid UFGT medium pass
Lusiscaffold760374020.1 Flavonoid UFGT medium pass
Lusiscaffold760374200.1 Flavonoid UFGT high pass
Lusiscaffold760374500.1 Flavonoid UFGT medium pass
Lusiscaffold760375850.1 Flavonoid UFGT medium pass
Lusiscaffold760375860.1 Flavonoid UFGT high pass
Lusiscaffold760375870.1 Flavonoid UFGT medium pass
Lusiscaffold770379420.1 Flavonoid UFGT medium pass
Lusiscaffold770379450.1 Flavonoid UFGT medium pass
Lusiscaffold7790381550.1 Flavonoid UFGT high pass
Lusiscaffold7830383690.1 Flavonoid UFGT medium pass
Lusiscaffold800386790.1 Flavonoid UFGT high pass
Lusiscaffold800386800.1 Flavonoid UFGT medium pass
Lusiscaffold800386810.1 Flavonoid UFGT medium pass
Lusiscaffold800386820.1 Flavonoid UFGT high pass
Lusiscaffold8120388730.1 Flavonoid UFGT high pass
Lusiscaffold8120389030.1 Flavonoid UFGT medium pass