PlantSME Plant secondary metabolism enzyme database

Linum usitatissimum (linum_usitatissimum)

Imported from atlas release summary for Linum usitatissimum.

2937
Candidate Protein Records
2406
Pathway-Level Records
5978
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 720 20 BAHD (265) View species results
Alkaloid pathway 546 26 7DLGT (120) View species results
Phenylpropanoid pathway 492 12 POD (211) View species results
Flavonoid pathway 313 11 UFGT (198) View species results
Rosmarinic acid pathway 219 7 C4H (89) View species results
Steroid pathway 116 12 CAS (42) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2315 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Lusiscaffold150066830.1 Flavonoid ANR medium borderline
Lusiscaffold16350088730.1 Flavonoid ANR medium borderline
Lusiscaffold16350088740.1 Flavonoid ANR medium borderline
Lusiscaffold1790100790.1 Flavonoid ANR medium borderline
Lusiscaffold1790100800.1 Flavonoid ANR medium borderline
Lusiscaffold2000114830.1 Flavonoid ANR medium borderline
Lusiscaffold20220115500.1 Flavonoid ANR low borderline
Lusiscaffold2040117140.1 Flavonoid ANR medium borderline
Lusiscaffold2040117150.1 Flavonoid ANR low borderline
Lusiscaffold2170125930.1 Flavonoid ANR medium borderline
Lusiscaffold2250131070.1 Flavonoid ANR low borderline
Lusiscaffold230134560.1 Flavonoid ANR medium borderline
Lusiscaffold2720160310.1 Flavonoid ANR medium borderline
Lusiscaffold2720162430.1 Flavonoid ANR low borderline
Lusiscaffold2750165780.1 Flavonoid ANR medium borderline
Lusiscaffold2800173510.1 Flavonoid ANR medium borderline
Lusiscaffold2910183440.1 Flavonoid ANR medium pass
Lusiscaffold2910183450.1 Flavonoid ANR medium pass
Lusiscaffold3190210960.1 Flavonoid ANR medium borderline
Lusiscaffold3190211780.1 Flavonoid ANR medium borderline
Lusiscaffold3250213650.1 Flavonoid ANR medium pass
Lusiscaffold3290217090.1 Flavonoid ANR low borderline
Lusiscaffold3530234120.1 Flavonoid ANR medium borderline
Lusiscaffold3720244680.1 Flavonoid ANR low borderline
Lusiscaffold3730246180.1 Flavonoid ANR low borderline
Lusiscaffold4200268360.1 Flavonoid ANR medium borderline
Lusiscaffold4200268380.1 Flavonoid ANR medium borderline
Lusiscaffold430269900.1 Flavonoid ANR medium borderline
Lusiscaffold4720293300.1 Flavonoid ANR low borderline
Lusiscaffold550318360.1 Flavonoid ANR medium borderline
Lusiscaffold740369530.1 Flavonoid ANR low borderline
Lusiscaffold8980409180.1 Flavonoid ANR medium borderline
Lusiscaffold1030005300.1 Flavonoid ANS/LDOX medium borderline
Lusiscaffold11700026940.1 Flavonoid ANS/LDOX medium pass
Lusiscaffold11700026950.1 Flavonoid ANS/LDOX medium borderline
Lusiscaffold140056330.1 Flavonoid ANS/LDOX medium pass
Lusiscaffold1650091550.1 Flavonoid ANS/LDOX medium pass
Lusiscaffold1990112510.1 Flavonoid ANS/LDOX medium borderline
Lusiscaffold20112960.1 Flavonoid ANS/LDOX medium borderline
Lusiscaffold2250130610.1 Flavonoid ANS/LDOX medium borderline
Lusiscaffold2610153250.1 Flavonoid ANS/LDOX medium borderline
Lusiscaffold2610154380.1 Flavonoid ANS/LDOX medium borderline
Lusiscaffold2800175500.1 Flavonoid ANS/LDOX medium borderline
Lusiscaffold3590236810.1 Flavonoid ANS/LDOX medium borderline
Lusiscaffold460279850.1 Flavonoid ANS/LDOX medium borderline
Lusiscaffold5050305800.1 Flavonoid ANS/LDOX medium borderline
Lusiscaffold7340368840.1 Flavonoid ANS/LDOX medium borderline
Lusiscaffold800386860.1 Flavonoid ANS/LDOX medium borderline
Lusiscaffold9770428640.1 Flavonoid ANS/LDOX medium borderline
Lusiscaffold980431740.1 Flavonoid ANS/LDOX low borderline