PlantSME Plant secondary metabolism enzyme database

Linum usitatissimum (linum_usitatissimum)

Imported from atlas release summary for Linum usitatissimum.

2937
Candidate Protein Records
2406
Pathway-Level Records
5978
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 720 20 BAHD (265) View species results
Alkaloid pathway 546 26 7DLGT (120) View species results
Phenylpropanoid pathway 492 12 POD (211) View species results
Flavonoid pathway 313 11 UFGT (198) View species results
Rosmarinic acid pathway 219 7 C4H (89) View species results
Steroid pathway 116 12 CAS (42) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2315 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Lusiscaffold6740356990.1 Flavonoid F3H medium borderline
Lusiscaffold7310367690.1 Flavonoid F3H medium borderline
Lusiscaffold7510372480.1 Flavonoid F3H medium borderline
Lusiscaffold760375810.1 Flavonoid F3H medium borderline
Lusiscaffold7650378310.1 Flavonoid F3H medium borderline
Lusiscaffold770379820.1 Flavonoid F3H low borderline
Lusiscaffold7830382210.1 Flavonoid F3H medium borderline
Lusiscaffold7830384150.1 Flavonoid F3H medium pass
Lusiscaffold8120388500.1 Flavonoid F3H medium borderline
Lusiscaffold820389460.1 Flavonoid F3H medium pass
Lusiscaffold860395490.1 Flavonoid F3H medium borderline
Lusiscaffold860398170.1 Flavonoid F3H medium borderline
Lusiscaffold860398190.1 Flavonoid F3H medium borderline
Lusiscaffold8630402470.1 Flavonoid F3H medium borderline
Lusiscaffold8660404300.1 Flavonoid F3H medium borderline
Lusiscaffold8830406820.1 Flavonoid F3H low borderline
Lusiscaffold8980408180.1 Flavonoid F3H medium borderline
Lusiscaffold9060414850.1 Flavonoid F3H medium borderline
Lusiscaffold9150418370.1 Flavonoid F3H low borderline
Lusiscaffold9170420180.1 Flavonoid F3H medium borderline
Lusiscaffold9240421630.1 Flavonoid F3H medium borderline
Lusiscaffold9310422770.1 Flavonoid F3H medium borderline
Lusiscaffold9310422780.1 Flavonoid F3H medium borderline
Lusiscaffold9310422790.1 Flavonoid F3H medium borderline
Lusiscaffold9310422830.1 Flavonoid F3H medium borderline
Lusiscaffold9310422840.1 Flavonoid F3H medium borderline
Lusiscaffold9310422850.1 Flavonoid F3H medium borderline
Lusiscaffold960425910.1 Flavonoid F3H medium borderline
Lusiscaffold9700428120.1 Flavonoid F3H medium borderline
Lusiscaffold9700428160.1 Flavonoid F3H medium borderline
Lusiscaffold9700428180.1 Flavonoid F3H medium borderline
Lusiscaffold9770430080.1 Flavonoid F3H low borderline
Lusiscaffold1220034550.1 Flavonoid FLS medium borderline
Lusiscaffold1230040500.1 Flavonoid FLS medium borderline
LusiC82357050000380.1 Flavonoid FNS medium borderline
Lusiscaffold1030005920.1 Flavonoid FNS medium borderline
Lusiscaffold11060015490.1 Flavonoid FNS medium borderline
Lusiscaffold11580023800.1 Flavonoid FNS medium borderline
Lusiscaffold120030650.1 Flavonoid FNS medium borderline
Lusiscaffold1270044700.1 Flavonoid FNS medium borderline
Lusiscaffold13110047610.1 Flavonoid FNS medium borderline
Lusiscaffold13130048100.1 Flavonoid FNS low borderline
Lusiscaffold13560053580.1 Flavonoid FNS low borderline
Lusiscaffold2090120950.1 Flavonoid FNS medium borderline
Lusiscaffold2170125320.1 Flavonoid FNS medium borderline
Lusiscaffold2310136970.1 Flavonoid FNS medium borderline
Lusiscaffold250145790.1 Flavonoid FNS medium borderline
Lusiscaffold28570178610.1 Flavonoid FNS medium borderline
Lusiscaffold3100204810.1 Flavonoid FNS medium borderline
Lusiscaffold3460228800.1 Flavonoid FNS medium borderline