PlantSME Plant secondary metabolism enzyme database

Linum usitatissimum (linum_usitatissimum)

Imported from atlas release summary for Linum usitatissimum.

2937
Candidate Protein Records
2406
Pathway-Level Records
5978
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 720 20 BAHD (265) View species results
Alkaloid pathway 546 26 7DLGT (120) View species results
Phenylpropanoid pathway 492 12 POD (211) View species results
Flavonoid pathway 313 11 UFGT (198) View species results
Rosmarinic acid pathway 219 7 C4H (89) View species results
Steroid pathway 116 12 CAS (42) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2315 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Lusiscaffold960426210.1 Rosmarinic Acid C4H low borderline
Lusiscaffold960426220.1 Rosmarinic Acid C4H low borderline
Lusiscaffold960426230.1 Rosmarinic Acid C4H low borderline
Lusiscaffold960426730.1 Rosmarinic Acid C4H low borderline
Lusiscaffold970427840.1 Rosmarinic Acid C4H low borderline
Lusiscaffold9770428590.1 Rosmarinic Acid C4H low borderline
Lusiscaffold9770428650.1 Rosmarinic Acid C4H low borderline
Lusiscaffold9770430090.1 Rosmarinic Acid C4H low borderline
Lusiscaffold10040003140.1 Rosmarinic Acid CPR medium pass
Lusiscaffold10680010530.1 Rosmarinic Acid CPR medium pass
Lusiscaffold11430021730.1 Rosmarinic Acid CPR medium pass
Lusiscaffold1270044550.1 Rosmarinic Acid CPR medium pass
Lusiscaffold19820111910.1 Rosmarinic Acid CPR medium pass
Lusiscaffold2050117980.1 Rosmarinic Acid CPR low borderline
Lusiscaffold21820127780.1 Rosmarinic Acid CPR low borderline
Lusiscaffold230133800.1 Rosmarinic Acid CPR medium pass
Lusiscaffold2720162840.1 Rosmarinic Acid CPR low borderline
Lusiscaffold2970190250.1 Rosmarinic Acid CPR low borderline
Lusiscaffold320212060.1 Rosmarinic Acid CPR medium pass
Lusiscaffold4130258610.1 Rosmarinic Acid CPR low borderline
Lusiscaffold460281000.1 Rosmarinic Acid CPR medium pass
Lusiscaffold460281010.1 Rosmarinic Acid CPR medium pass
Lusiscaffold7650377190.1 Rosmarinic Acid CPR medium pass
Lusiscaffold8600400280.1 Rosmarinic Acid CPR medium pass
Lusiscaffold970427960.1 Rosmarinic Acid CPR medium pass
Lusiscaffold15580077140.1 Rosmarinic Acid HPPR medium pass
Lusiscaffold15780082030.1 Rosmarinic Acid HPPR medium pass
Lusiscaffold1960108920.1 Rosmarinic Acid HPPR medium pass
Lusiscaffold2310135900.1 Rosmarinic Acid HPPR medium pass
Lusiscaffold2800177110.1 Rosmarinic Acid HPPR medium pass
Lusiscaffold2800177120.1 Rosmarinic Acid HPPR medium pass
Lusiscaffold2800177130.1 Rosmarinic Acid HPPR medium pass
Lusiscaffold29320187400.1 Rosmarinic Acid HPPR medium pass
Lusiscaffold3420227050.1 Rosmarinic Acid HPPR low borderline
Lusiscaffold570323110.1 Rosmarinic Acid HPPR medium pass
Lusiscaffold570323120.1 Rosmarinic Acid HPPR medium pass
Lusiscaffold570323130.1 Rosmarinic Acid HPPR medium pass
Lusiscaffold6050334420.1 Rosmarinic Acid HPPR medium pass
Lusiscaffold6050334430.1 Rosmarinic Acid HPPR medium pass
Lusiscaffold760373650.1 Rosmarinic Acid HPPR medium pass
Lusiscaffold760373660.1 Rosmarinic Acid HPPR medium pass
Lusiscaffold10170004510.1 Rosmarinic Acid PAL high pass
Lusiscaffold12160033690.1 Rosmarinic Acid PAL high pass
Lusiscaffold21030121920.1 Rosmarinic Acid PAL low borderline
Lusiscaffold2670155680.1 Rosmarinic Acid PAL low borderline
Lusiscaffold6170338770.1 Rosmarinic Acid PAL high pass
Lusiscaffold6180340680.1 Rosmarinic Acid PAL high pass
Lusiscaffold860398530.1 Rosmarinic Acid PAL high pass
Lusiscaffold1200031120.1 Rosmarinic Acid RAS medium pass
Lusiscaffold12470041960.1 Rosmarinic Acid RAS low borderline