PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLH
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Gene Pathway Family Confidence Status
Pcabscaffold_100006440.1 Alkaloid 7DLH medium borderline
Pcabscaffold_100006450.1 Alkaloid 7DLH medium borderline
Pcabscaffold_100006460.1 Alkaloid 7DLH medium borderline
Pcabscaffold_100006470.1 Alkaloid 7DLH medium pass
Pcabscaffold_10100017120.1 Alkaloid 7DLH medium borderline
Pcabscaffold_10100017140.1 Alkaloid 7DLH medium borderline
Pcabscaffold_105_81081-20652500035200.1 Alkaloid 7DLH low borderline
Pcabscaffold_10710042870.1 Alkaloid 7DLH medium borderline
Pcabscaffold_10710042880.1 Alkaloid 7DLH medium borderline
Pcabscaffold_10990050870.1 Alkaloid 7DLH medium borderline
Pcabscaffold_110051190.1 Alkaloid 7DLH medium borderline
Pcabscaffold_112_419008-19102860064430.1 Alkaloid 7DLH medium borderline
Pcabscaffold_11420069230.1 Alkaloid 7DLH medium borderline
Pcabscaffold_114_1-11005400071900.1 Alkaloid 7DLH medium borderline
Pcabscaffold_114_1-11005400071910.1 Alkaloid 7DLH low borderline
Pcabscaffold_11780083600.1 Alkaloid 7DLH medium borderline
Pcabscaffold_1182_1-2815260084410.1 Alkaloid 7DLH low borderline
Pcabscaffold_1190088280.1 Alkaloid 7DLH medium borderline
Pcabscaffold_1190088780.1 Alkaloid 7DLH low borderline
Pcabscaffold_12380105580.1 Alkaloid 7DLH medium borderline
Pcabscaffold_12430108540.1 Alkaloid 7DLH low borderline
Pcabscaffold_12510113350.1 Alkaloid 7DLH medium borderline
Pcabscaffold_12510113360.1 Alkaloid 7DLH medium borderline
Pcabscaffold_12510113370.1 Alkaloid 7DLH medium borderline
Pcabscaffold_12510113390.1 Alkaloid 7DLH medium borderline
Pcabscaffold_12510113400.1 Alkaloid 7DLH medium borderline
Pcabscaffold_12580114990.1 Alkaloid 7DLH medium borderline
Pcabscaffold_12580115000.1 Alkaloid 7DLH medium borderline
Pcabscaffold_12580115010.1 Alkaloid 7DLH medium borderline
Pcabscaffold_12580115030.1 Alkaloid 7DLH medium borderline
Pcabscaffold_12580115040.1 Alkaloid 7DLH medium borderline
Pcabscaffold_12580115060.1 Alkaloid 7DLH medium borderline
Pcabscaffold_12580115080.1 Alkaloid 7DLH medium borderline
Pcabscaffold_130136560.1 Alkaloid 7DLH medium borderline
Pcabscaffold_130136570.1 Alkaloid 7DLH medium borderline
Pcabscaffold_130136580.1 Alkaloid 7DLH medium borderline
Pcabscaffold_13030139940.1 Alkaloid 7DLH medium borderline
Pcabscaffold_13030139950.1 Alkaloid 7DLH medium borderline
Pcabscaffold_13190144020.1 Alkaloid 7DLH low borderline
Pcabscaffold_13560158120.1 Alkaloid 7DLH low borderline
Pcabscaffold_13730166630.1 Alkaloid 7DLH medium borderline
Pcabscaffold_146_1-9101720205940.1 Alkaloid 7DLH medium borderline
Pcabscaffold_15020222940.1 Alkaloid 7DLH medium borderline
Pcabscaffold_160257090.1 Alkaloid 7DLH medium borderline
Pcabscaffold_17190293560.1 Alkaloid 7DLH medium borderline
Pcabscaffold_17480301950.1 Alkaloid 7DLH medium borderline
Pcabscaffold_17480301960.1 Alkaloid 7DLH medium borderline
Pcabscaffold_1780310730.1 Alkaloid 7DLH medium borderline
Pcabscaffold_1780310780.1 Alkaloid 7DLH medium borderline
Pcabscaffold_1780310790.1 Alkaloid 7DLH medium borderline