PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLH
Reset
Gene Pathway Family Confidence Status
Pcabscaffold_1780310810.1 Alkaloid 7DLH medium borderline
Pcabscaffold_1780310820.1 Alkaloid 7DLH medium borderline
Pcabscaffold_1780310830.1 Alkaloid 7DLH medium borderline
Pcabscaffold_1780310840.1 Alkaloid 7DLH medium borderline
Pcabscaffold_18970344590.1 Alkaloid 7DLH medium borderline
Pcabscaffold_1930357220.1 Alkaloid 7DLH medium borderline
Pcabscaffold_1930357240.1 Alkaloid 7DLH medium borderline
Pcabscaffold_1_1017389-68718490378940.1 Alkaloid 7DLH medium borderline
Pcabscaffold_200388460.1 Alkaloid 7DLH medium borderline
Pcabscaffold_2030399590.1 Alkaloid 7DLH low borderline
Pcabscaffold_20730410750.1 Alkaloid 7DLH medium borderline
Pcabscaffold_2460494160.1 Alkaloid 7DLH medium borderline
Pcabscaffold_25_430986-37583860515330.1 Alkaloid 7DLH medium borderline
Pcabscaffold_26390525420.1 Alkaloid 7DLH medium borderline
Pcabscaffold_2800554990.1 Alkaloid 7DLH medium borderline
Pcabscaffold_2820556480.1 Alkaloid 7DLH low borderline
Pcabscaffold_2860562190.1 Alkaloid 7DLH medium borderline
Pcabscaffold_30510593930.1 Alkaloid 7DLH medium borderline
Pcabscaffold_30510593940.1 Alkaloid 7DLH medium borderline
Pcabscaffold_3170608990.1 Alkaloid 7DLH medium borderline
Pcabscaffold_3170609030.1 Alkaloid 7DLH medium borderline
Pcabscaffold_32490619700.1 Alkaloid 7DLH medium borderline
Pcabscaffold_33_1-27880680639980.1 Alkaloid 7DLH medium borderline
Pcabscaffold_36910672130.1 Alkaloid 7DLH low borderline
Pcabscaffold_3880693610.1 Alkaloid 7DLH medium borderline
Pcabscaffold_40_1-6370950723530.1 Alkaloid 7DLH medium borderline
Pcabscaffold_40_1-6370950723830.1 Alkaloid 7DLH medium borderline
Pcabscaffold_40_1-6370950723840.1 Alkaloid 7DLH medium borderline
Pcabscaffold_40_1-6370950723850.1 Alkaloid 7DLH medium borderline
Pcabscaffold_40_1-6370950723860.1 Alkaloid 7DLH medium borderline
Pcabscaffold_40_1-6370950723870.1 Alkaloid 7DLH medium borderline
Pcabscaffold_40_1-6370950723880.1 Alkaloid 7DLH medium borderline
Pcabscaffold_40_1-6370950723890.1 Alkaloid 7DLH medium borderline
Pcabscaffold_40_644123-29686580723910.1 Alkaloid 7DLH medium borderline
Pcabscaffold_40_644123-29686580723930.1 Alkaloid 7DLH medium borderline
Pcabscaffold_40_644123-29686580723940.1 Alkaloid 7DLH medium borderline
Pcabscaffold_4320744790.1 Alkaloid 7DLH medium borderline
Pcabscaffold_4320744800.1 Alkaloid 7DLH medium borderline
Pcabscaffold_45420760790.1 Alkaloid 7DLH low borderline
Pcabscaffold_4730778730.1 Alkaloid 7DLH low borderline
Pcabscaffold_480784690.1 Alkaloid 7DLH medium borderline
Pcabscaffold_480785360.1 Alkaloid 7DLH medium borderline
Pcabscaffold_4810787440.1 Alkaloid 7DLH medium borderline
Pcabscaffold_4810787540.1 Alkaloid 7DLH low borderline
Pcabscaffold_4810787550.1 Alkaloid 7DLH low borderline
Pcabscaffold_4810787570.1 Alkaloid 7DLH low borderline
Pcabscaffold_5090816880.1 Alkaloid 7DLH medium borderline
Pcabscaffold_5090816970.1 Alkaloid 7DLH medium pass
Pcabscaffold_5090816980.1 Alkaloid 7DLH medium borderline
Pcabscaffold_5090816990.1 Alkaloid 7DLH medium borderline