PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLH
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Gene Pathway Family Confidence Status
Pcabscaffold_5210826210.1 Alkaloid 7DLH medium borderline
Pcabscaffold_5210826220.1 Alkaloid 7DLH medium borderline
Pcabscaffold_5210826230.1 Alkaloid 7DLH medium borderline
Pcabscaffold_5210826260.1 Alkaloid 7DLH medium borderline
Pcabscaffold_5210826270.1 Alkaloid 7DLH medium borderline
Pcabscaffold_5210826290.1 Alkaloid 7DLH medium borderline
Pcabscaffold_5210826300.1 Alkaloid 7DLH medium borderline
Pcabscaffold_5210826310.1 Alkaloid 7DLH medium borderline
Pcabscaffold_5210826320.1 Alkaloid 7DLH medium borderline
Pcabscaffold_5210826330.1 Alkaloid 7DLH medium borderline
Pcabscaffold_5210826340.1 Alkaloid 7DLH medium borderline
Pcabscaffold_540840960.1 Alkaloid 7DLH medium borderline
Pcabscaffold_5650855900.1 Alkaloid 7DLH medium borderline
Pcabscaffold_56_1-23225690858790.1 Alkaloid 7DLH medium borderline
Pcabscaffold_5720864440.1 Alkaloid 7DLH low borderline
Pcabscaffold_6000883430.1 Alkaloid 7DLH medium borderline
Pcabscaffold_6350907330.1 Alkaloid 7DLH medium borderline
Pcabscaffold_6400911180.1 Alkaloid 7DLH medium borderline
Pcabscaffold_7030945850.1 Alkaloid 7DLH medium borderline
Pcabscaffold_730960460.1 Alkaloid 7DLH low borderline
Pcabscaffold_730960940.1 Alkaloid 7DLH medium borderline
Pcabscaffold_76_600587-28138150981730.1 Alkaloid 7DLH medium borderline
Pcabscaffold_770983670.1 Alkaloid 7DLH medium borderline
Pcabscaffold_770983680.1 Alkaloid 7DLH medium pass
Pcabscaffold_770983780.1 Alkaloid 7DLH medium borderline
Pcabscaffold_7720986000.1 Alkaloid 7DLH medium borderline
Pcabscaffold_8511032750.1 Alkaloid 7DLH low borderline
Pcabscaffold_871043320.1 Alkaloid 7DLH medium borderline
Pcabscaffold_871044030.1 Alkaloid 7DLH medium borderline
Pcabscaffold_88_311528-23538291054160.1 Alkaloid 7DLH medium borderline
Pcabscaffold_911064360.1 Alkaloid 7DLH medium borderline
Pcabscaffold_921071290.1 Alkaloid 7DLH medium borderline
Pcabscaffold_951086400.1 Alkaloid 7DLH medium borderline
Pcabscaffold_951086640.1 Alkaloid 7DLH medium borderline
Pcabscaffold_9761099070.1 Alkaloid 7DLH medium borderline