PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ANR
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Gene Pathway Family Confidence Status
Pcabscaffold_33130629810.1 Flavonoid ANR medium borderline
Pcabscaffold_3380637630.1 Flavonoid ANR medium borderline
Pcabscaffold_40_644123-29686580725020.1 Flavonoid ANR medium borderline
Pcabscaffold_429_1-8336930739470.1 Flavonoid ANR medium borderline
Pcabscaffold_4_900905-60197250804540.1 Flavonoid ANR low borderline
Pcabscaffold_5020813680.1 Flavonoid ANR low borderline
Pcabscaffold_530831910.1 Flavonoid ANR medium borderline
Pcabscaffold_5490847030.1 Flavonoid ANR low borderline
Pcabscaffold_5680856940.1 Flavonoid ANR low borderline
Pcabscaffold_58980874250.1 Flavonoid ANR medium borderline
Pcabscaffold_58980874260.1 Flavonoid ANR low borderline
Pcabscaffold_640910810.1 Flavonoid ANR medium borderline
Pcabscaffold_640910820.1 Flavonoid ANR medium borderline
Pcabscaffold_690939430.1 Flavonoid ANR medium borderline
Pcabscaffold_7750986870.1 Flavonoid ANR medium borderline
Pcabscaffold_7750986880.1 Flavonoid ANR medium borderline
Pcabscaffold_780989540.1 Flavonoid ANR medium borderline
Pcabscaffold_780989560.1 Flavonoid ANR medium borderline
Pcabscaffold_780989580.1 Flavonoid ANR medium borderline
Pcabscaffold_8921056680.1 Flavonoid ANR medium borderline
Pcabscaffold_8921056690.1 Flavonoid ANR medium borderline
Pcabscaffold_9341080460.1 Flavonoid ANR medium borderline
Pcabscaffold_941081890.1 Flavonoid ANR low borderline
Pcabscaffold_9_15686-49974061108170.1 Flavonoid ANR medium borderline