PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

7526
Candidate Protein Records
5906
Pathway-Level Records
16043
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BBE
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Pcabscaffold_8601040450.1 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
Pcabscaffold_8601040630.1 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
Pcabscaffold_8601040770.1 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
Pcabscaffold_8601040780.1 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
Pcabscaffold_8601040790.1 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
Pcabscaffold_8601040800.1 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
Pcabscaffold_8601040820.1 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
Pcabscaffold_8601040830.1 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
Pcabscaffold_8601040840.1 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
Pcabscaffold_8601040880.1 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
Pcabscaffold_8601040900.1 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
Pcabscaffold_8601040910.1 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
Pcabscaffold_8601040920.1 Alkaloid BBE medium borderline BBE__00003__sp_F1T161_BBLC1_TOBAC
Pcabscaffold_8601040930.1 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
Pcabscaffold_8601040950.1 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
Pcabscaffold_8601040980.1 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
Pcabscaffold_8601040990.1 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
Pcabscaffold_861037360.1 Alkaloid BBE medium borderline BBE__00003__sp_F1T161_BBLC1_TOBAC
Pcabscaffold_861037370.1 Alkaloid BBE low borderline BBE__00001__sp_A7WPL6_BBLB_TOBAC
Pcabscaffold_90711064090.1 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
Pcabscaffold_9081064120.1 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
Pcabscaffold_951086370.1 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
Pcabscaffold_951086380.1 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
Pcabscaffold_951086630.1 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
Pcabscaffold_991102940.1 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
Pcabscaffold_991102950.1 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH