PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAD
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Gene Pathway Family Confidence Status
Pcabscaffold_0_1-16463080000770.1 Phenylpropanoid CAD low borderline
Pcabscaffold_10900048780.1 Phenylpropanoid CAD medium borderline
Pcabscaffold_10900048800.1 Phenylpropanoid CAD medium borderline
Pcabscaffold_110052380.1 Phenylpropanoid CAD medium pass
Pcabscaffold_110_71771-19721700055490.1 Phenylpropanoid CAD low borderline
Pcabscaffold_11120058570.1 Phenylpropanoid CAD low borderline
Pcabscaffold_11120058590.1 Phenylpropanoid CAD medium borderline
Pcabscaffold_11120058640.1 Phenylpropanoid CAD medium borderline
Pcabscaffold_11120058650.1 Phenylpropanoid CAD medium borderline
Pcabscaffold_11180060380.1 Phenylpropanoid CAD medium pass
Pcabscaffold_11180060510.1 Phenylpropanoid CAD medium pass
Pcabscaffold_11240061510.1 Phenylpropanoid CAD low borderline
Pcabscaffold_11240061830.1 Phenylpropanoid CAD medium borderline
Pcabscaffold_114_1103768-21090250072870.1 Phenylpropanoid CAD medium pass
Pcabscaffold_1150074040.1 Phenylpropanoid CAD medium pass
Pcabscaffold_11730081660.1 Phenylpropanoid CAD medium pass
Pcabscaffold_118_1-11863150086110.1 Phenylpropanoid CAD low borderline
Pcabscaffold_118_1195083-18067710087120.1 Phenylpropanoid CAD low borderline
Pcabscaffold_122_1075706-18185570103520.1 Phenylpropanoid CAD medium borderline
Pcabscaffold_122_1075706-18185570103530.1 Phenylpropanoid CAD medium borderline
Pcabscaffold_122_1075706-18185570103540.1 Phenylpropanoid CAD medium borderline
Pcabscaffold_122_1075706-18185570103580.1 Phenylpropanoid CAD medium borderline
Pcabscaffold_123_1686054-19452770107130.1 Phenylpropanoid CAD medium pass
Pcabscaffold_124500109060.1 Phenylpropanoid CAD low borderline
Pcabscaffold_12470109290.1 Phenylpropanoid CAD low borderline
Pcabscaffold_1260116070.1 Phenylpropanoid CAD low borderline
Pcabscaffold_1260117440.1 Phenylpropanoid CAD medium pass
Pcabscaffold_12880126370.1 Phenylpropanoid CAD medium borderline
Pcabscaffold_13130142550.1 Phenylpropanoid CAD medium borderline
Pcabscaffold_13480153710.1 Phenylpropanoid CAD low borderline
Pcabscaffold_13540157620.1 Phenylpropanoid CAD medium borderline
Pcabscaffold_135630158290.1 Phenylpropanoid CAD low borderline
Pcabscaffold_13730166510.1 Phenylpropanoid CAD low borderline
Pcabscaffold_1390170660.1 Phenylpropanoid CAD low borderline
Pcabscaffold_13970173850.1 Phenylpropanoid CAD medium pass
Pcabscaffold_13970173900.1 Phenylpropanoid CAD medium pass
Pcabscaffold_140176160.1 Phenylpropanoid CAD medium pass
Pcabscaffold_14110183070.1 Phenylpropanoid CAD low borderline
Pcabscaffold_14110183080.1 Phenylpropanoid CAD low borderline
Pcabscaffold_1420187110.1 Phenylpropanoid CAD medium borderline
Pcabscaffold_14280188840.1 Phenylpropanoid CAD medium pass
Pcabscaffold_14730207330.1 Phenylpropanoid CAD low borderline
Pcabscaffold_14800212560.1 Phenylpropanoid CAD medium borderline
Pcabscaffold_1480210490.1 Phenylpropanoid CAD medium borderline
Pcabscaffold_1480210500.1 Phenylpropanoid CAD medium borderline
Pcabscaffold_1480210520.1 Phenylpropanoid CAD medium borderline
Pcabscaffold_150216790.1 Phenylpropanoid CAD medium pass
Pcabscaffold_15130227780.1 Phenylpropanoid CAD low borderline
Pcabscaffold_15200229770.1 Phenylpropanoid CAD low borderline
Pcabscaffold_1520229300.1 Phenylpropanoid CAD low borderline