PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CNMT
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Gene Pathway Family Confidence Status
Pcabscaffold_10310025890.1 Alkaloid CNMT low borderline
Pcabscaffold_10570033980.1 Alkaloid CNMT medium borderline
Pcabscaffold_10940049440.1 Alkaloid CNMT low borderline
Pcabscaffold_118_1195083-18067710087250.1 Alkaloid CNMT low borderline
Pcabscaffold_1200092680.1 Alkaloid CNMT low borderline
Pcabscaffold_12100097270.1 Alkaloid CNMT low borderline
Pcabscaffold_12100097330.1 Alkaloid CNMT low borderline
Pcabscaffold_12580115140.1 Alkaloid CNMT low borderline
Pcabscaffold_12900127780.1 Alkaloid CNMT medium pass
Pcabscaffold_12900127800.1 Alkaloid CNMT medium pass
Pcabscaffold_12900127820.1 Alkaloid CNMT medium pass
Pcabscaffold_12900127850.1 Alkaloid CNMT medium pass
Pcabscaffold_12900127860.1 Alkaloid CNMT medium pass
Pcabscaffold_1530232050.1 Alkaloid CNMT low borderline
Pcabscaffold_15560241070.1 Alkaloid CNMT low borderline
Pcabscaffold_17550302800.1 Alkaloid CNMT low borderline
Pcabscaffold_17550302810.1 Alkaloid CNMT medium pass
Pcabscaffold_1780310910.1 Alkaloid CNMT low borderline
Pcabscaffold_180318410.1 Alkaloid CNMT low borderline
Pcabscaffold_1820327750.1 Alkaloid CNMT low borderline
Pcabscaffold_200391270.1 Alkaloid CNMT low borderline
Pcabscaffold_200391280.1 Alkaloid CNMT medium pass
Pcabscaffold_200391290.1 Alkaloid CNMT low borderline
Pcabscaffold_22210445150.1 Alkaloid CNMT low borderline
Pcabscaffold_230460830.1 Alkaloid CNMT low borderline
Pcabscaffold_230464050.1 Alkaloid CNMT medium borderline
Pcabscaffold_26830535460.1 Alkaloid CNMT medium pass
Pcabscaffold_26830535470.1 Alkaloid CNMT medium pass
Pcabscaffold_2750548790.1 Alkaloid CNMT low borderline
Pcabscaffold_2820557240.1 Alkaloid CNMT medium pass
Pcabscaffold_2820557250.1 Alkaloid CNMT medium pass
Pcabscaffold_33_1-27880680639090.1 Alkaloid CNMT low borderline
Pcabscaffold_36790669450.1 Alkaloid CNMT low borderline
Pcabscaffold_3800686250.1 Alkaloid CNMT medium pass
Pcabscaffold_3800686260.1 Alkaloid CNMT medium pass
Pcabscaffold_3800686270.1 Alkaloid CNMT low borderline
Pcabscaffold_3800686280.1 Alkaloid CNMT medium pass
Pcabscaffold_3800686290.1 Alkaloid CNMT medium pass
Pcabscaffold_3800686330.1 Alkaloid CNMT low borderline
Pcabscaffold_380684810.1 Alkaloid CNMT low borderline
Pcabscaffold_40_644123-29686580724110.1 Alkaloid CNMT low borderline
Pcabscaffold_4190732840.1 Alkaloid CNMT low borderline
Pcabscaffold_4_900905-60197250805150.1 Alkaloid CNMT medium borderline
Pcabscaffold_51710824080.1 Alkaloid CNMT low borderline
Pcabscaffold_5250828450.1 Alkaloid CNMT low borderline
Pcabscaffold_6560919720.1 Alkaloid CNMT low borderline
Pcabscaffold_6560919730.1 Alkaloid CNMT medium pass
Pcabscaffold_6700928710.1 Alkaloid CNMT low borderline
Pcabscaffold_7070947310.1 Alkaloid CNMT low borderline
Pcabscaffold_7910995870.1 Alkaloid CNMT low borderline