PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CODM/T6ODM
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Gene Pathway Family Confidence Status
Pcabscaffold_0_1-16463080000260.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_1000011250.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_10110017400.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_10180019280.1 Alkaloid CODM/T6ODM low borderline
Pcabscaffold_10360027070.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_10710042940.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_11130059020.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_11150059400.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_11350067530.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_118_1-11863150086260.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_12560114670.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_12560114680.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_12880126480.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_12880126500.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_12900127720.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_130136250.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_13180143660.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_13180143670.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_13270147160.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_1350154200.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_1350156700.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_1360161890.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_1370164530.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_1370164700.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_13730166520.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_1390170050.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_1420186170.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_1450200730.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_14530201480.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_14530201490.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_14530201500.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_14670204560.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_14680204840.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_147_1322235-15985100209870.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_15460237350.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_1550238410.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_1550238420.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_1580249600.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_159_1-16866950256460.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_1600259300.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_1650274090.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_1670280980.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_16740281680.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_16740281840.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_1710291740.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_1710291760.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_1820326250.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_1850333490.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_18780340490.1 Alkaloid CODM/T6ODM medium borderline
Pcabscaffold_18780340680.1 Alkaloid CODM/T6ODM medium borderline