PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: COMT
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Gene Pathway Family Confidence Status
Pcabscaffold_100007990.1 Phenylpropanoid COMT medium pass
Pcabscaffold_100008000.1 Phenylpropanoid COMT medium pass
Pcabscaffold_11110058470.1 Phenylpropanoid COMT medium pass
Pcabscaffold_11130058830.1 Phenylpropanoid COMT low borderline
Pcabscaffold_1130066130.1 Phenylpropanoid COMT low borderline
Pcabscaffold_1130066140.1 Phenylpropanoid COMT medium pass
Pcabscaffold_1130066150.1 Phenylpropanoid COMT medium pass
Pcabscaffold_114_1-11005400072190.1 Phenylpropanoid COMT low borderline
Pcabscaffold_11740081730.1 Phenylpropanoid COMT low borderline
Pcabscaffold_11740081740.1 Phenylpropanoid COMT low borderline
Pcabscaffold_11740081750.1 Phenylpropanoid COMT medium pass
Pcabscaffold_11760082560.1 Phenylpropanoid COMT medium pass
Pcabscaffold_11760082580.1 Phenylpropanoid COMT low borderline
Pcabscaffold_11760082610.1 Phenylpropanoid COMT medium pass
Pcabscaffold_11900089750.1 Phenylpropanoid COMT low borderline
Pcabscaffold_11900089760.1 Phenylpropanoid COMT low borderline
Pcabscaffold_130135050.1 Phenylpropanoid COMT medium pass
Pcabscaffold_130135060.1 Phenylpropanoid COMT medium pass
Pcabscaffold_130135070.1 Phenylpropanoid COMT medium pass
Pcabscaffold_130135080.1 Phenylpropanoid COMT low borderline
Pcabscaffold_130135110.1 Phenylpropanoid COMT medium pass
Pcabscaffold_130138090.1 Phenylpropanoid COMT medium pass
Pcabscaffold_13560158080.1 Phenylpropanoid COMT low borderline
Pcabscaffold_1360160730.1 Phenylpropanoid COMT low borderline
Pcabscaffold_1360160740.1 Phenylpropanoid COMT medium pass
Pcabscaffold_1360160750.1 Phenylpropanoid COMT medium pass
Pcabscaffold_1360160760.1 Phenylpropanoid COMT medium pass
Pcabscaffold_1360160770.1 Phenylpropanoid COMT medium pass
Pcabscaffold_1360160780.1 Phenylpropanoid COMT medium pass
Pcabscaffold_1360160790.1 Phenylpropanoid COMT medium pass
Pcabscaffold_13910172690.1 Phenylpropanoid COMT low borderline
Pcabscaffold_13910172700.1 Phenylpropanoid COMT medium pass
Pcabscaffold_13910172710.1 Phenylpropanoid COMT medium pass
Pcabscaffold_13910172720.1 Phenylpropanoid COMT medium pass
Pcabscaffold_14190185250.1 Phenylpropanoid COMT medium pass
Pcabscaffold_15160228700.1 Phenylpropanoid COMT medium pass
Pcabscaffold_15160228710.1 Phenylpropanoid COMT low borderline
Pcabscaffold_15160228720.1 Phenylpropanoid COMT medium pass
Pcabscaffold_15160228730.1 Phenylpropanoid COMT medium pass
Pcabscaffold_15160228750.1 Phenylpropanoid COMT medium pass
Pcabscaffold_15160228760.1 Phenylpropanoid COMT medium pass
Pcabscaffold_1570245330.1 Phenylpropanoid COMT medium pass
Pcabscaffold_1600258990.1 Phenylpropanoid COMT medium pass
Pcabscaffold_16290268760.1 Phenylpropanoid COMT low borderline
Pcabscaffold_1720295240.1 Phenylpropanoid COMT low borderline
Pcabscaffold_17800311570.1 Phenylpropanoid COMT low borderline
Pcabscaffold_18170325360.1 Phenylpropanoid COMT medium pass
Pcabscaffold_18200327900.1 Phenylpropanoid COMT low borderline
Pcabscaffold_188350342570.1 Phenylpropanoid COMT medium pass
Pcabscaffold_19610364790.1 Phenylpropanoid COMT medium pass