PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: COMT
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Gene Pathway Family Confidence Status
Pcabscaffold_4_900905-60197250804670.1 Phenylpropanoid COMT medium pass
Pcabscaffold_5050814870.1 Phenylpropanoid COMT medium pass
Pcabscaffold_5050814880.1 Phenylpropanoid COMT low borderline
Pcabscaffold_5050814890.1 Phenylpropanoid COMT low borderline
Pcabscaffold_5090817310.1 Phenylpropanoid COMT low borderline
Pcabscaffold_52120826400.1 Phenylpropanoid COMT medium pass
Pcabscaffold_55680852250.1 Phenylpropanoid COMT medium pass
Pcabscaffold_5810869890.1 Phenylpropanoid COMT low borderline
Pcabscaffold_6260900820.1 Phenylpropanoid COMT medium pass
Pcabscaffold_62810902310.1 Phenylpropanoid COMT medium pass
Pcabscaffold_6800933410.1 Phenylpropanoid COMT medium pass
Pcabscaffold_6870936620.1 Phenylpropanoid COMT medium pass
Pcabscaffold_6870936630.1 Phenylpropanoid COMT medium pass
Pcabscaffold_7110951980.1 Phenylpropanoid COMT medium pass
Pcabscaffold_7210955560.1 Phenylpropanoid COMT medium pass
Pcabscaffold_7700984740.1 Phenylpropanoid COMT low borderline
Pcabscaffold_7700984750.1 Phenylpropanoid COMT low borderline
Pcabscaffold_7700984760.1 Phenylpropanoid COMT medium pass
Pcabscaffold_7700984770.1 Phenylpropanoid COMT low borderline
Pcabscaffold_7700984780.1 Phenylpropanoid COMT medium pass
Pcabscaffold_7700984790.1 Phenylpropanoid COMT low borderline
Pcabscaffold_770983400.1 Phenylpropanoid COMT low borderline
Pcabscaffold_780988830.1 Phenylpropanoid COMT medium pass
Pcabscaffold_8061007550.1 Phenylpropanoid COMT medium pass
Pcabscaffold_8061007580.1 Phenylpropanoid COMT medium pass
Pcabscaffold_8101014470.1 Phenylpropanoid COMT low borderline
Pcabscaffold_8391028560.1 Phenylpropanoid COMT medium pass
Pcabscaffold_861039850.1 Phenylpropanoid COMT low borderline
Pcabscaffold_861039870.1 Phenylpropanoid COMT low borderline
Pcabscaffold_861039880.1 Phenylpropanoid COMT medium pass
Pcabscaffold_87211046830.1 Phenylpropanoid COMT low borderline
Pcabscaffold_89361057210.1 Phenylpropanoid COMT medium pass
Pcabscaffold_89361057220.1 Phenylpropanoid COMT medium pass
Pcabscaffold_921070420.1 Phenylpropanoid COMT medium pass