PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
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Gene Pathway Family Confidence Status
Pcabscaffold_205_1-13483090406170.1 Phenylpropanoid CSE medium pass
Pcabscaffold_21040418550.1 Phenylpropanoid CSE medium pass
Pcabscaffold_211_847-14465410420670.1 Phenylpropanoid CSE medium pass
Pcabscaffold_211_847-14465410420720.1 Phenylpropanoid CSE medium pass
Pcabscaffold_21430427710.1 Phenylpropanoid CSE low borderline
Pcabscaffold_2170433280.1 Phenylpropanoid CSE medium pass
Pcabscaffold_23610475820.1 Phenylpropanoid CSE medium pass
Pcabscaffold_240483780.1 Phenylpropanoid CSE low borderline
Pcabscaffold_2460494530.1 Phenylpropanoid CSE medium pass
Pcabscaffold_252_1-5600220503180.1 Phenylpropanoid CSE low borderline
Pcabscaffold_252_564642-10537760503240.1 Phenylpropanoid CSE low borderline
Pcabscaffold_25460505590.1 Phenylpropanoid CSE medium pass
Pcabscaffold_25460505600.1 Phenylpropanoid CSE medium pass
Pcabscaffold_25460505620.1 Phenylpropanoid CSE medium pass
Pcabscaffold_25910512590.1 Phenylpropanoid CSE medium pass
Pcabscaffold_25_430986-37583860515390.1 Phenylpropanoid CSE low borderline
Pcabscaffold_25_430986-37583860515400.1 Phenylpropanoid CSE medium pass
Pcabscaffold_27290544450.1 Phenylpropanoid CSE medium pass
Pcabscaffold_28870564970.1 Phenylpropanoid CSE medium pass
Pcabscaffold_28870564980.1 Phenylpropanoid CSE medium pass
Pcabscaffold_2990582020.1 Phenylpropanoid CSE medium pass
Pcabscaffold_30490593520.1 Phenylpropanoid CSE medium pass
Pcabscaffold_30490593540.1 Phenylpropanoid CSE medium pass
Pcabscaffold_31810610240.1 Phenylpropanoid CSE medium pass
Pcabscaffold_3520654420.1 Phenylpropanoid CSE medium pass
Pcabscaffold_3520654430.1 Phenylpropanoid CSE medium pass
Pcabscaffold_3520654520.1 Phenylpropanoid CSE medium pass
Pcabscaffold_360660020.1 Phenylpropanoid CSE medium pass
Pcabscaffold_360660030.1 Phenylpropanoid CSE medium pass
Pcabscaffold_360660040.1 Phenylpropanoid CSE low borderline
Pcabscaffold_3840689900.1 Phenylpropanoid CSE medium pass
Pcabscaffold_3970700910.1 Phenylpropanoid CSE medium pass
Pcabscaffold_3970700920.1 Phenylpropanoid CSE medium pass
Pcabscaffold_3_2646351-60804880711750.1 Phenylpropanoid CSE medium pass
Pcabscaffold_3_2646351-60804880711760.1 Phenylpropanoid CSE medium pass
Pcabscaffold_3_2646351-60804880712860.1 Phenylpropanoid CSE medium pass
Pcabscaffold_3_2646351-60804880712870.1 Phenylpropanoid CSE medium pass
Pcabscaffold_4060720010.1 Phenylpropanoid CSE medium pass
Pcabscaffold_4070721300.1 Phenylpropanoid CSE medium pass
Pcabscaffold_40_1-6370950723660.1 Phenylpropanoid CSE medium pass
Pcabscaffold_410_1-4271820727060.1 Phenylpropanoid CSE medium pass
Pcabscaffold_413_1-7239790729120.1 Phenylpropanoid CSE medium pass
Pcabscaffold_413_1-7239790729130.1 Phenylpropanoid CSE medium pass
Pcabscaffold_413_1-7239790729300.1 Phenylpropanoid CSE medium pass
Pcabscaffold_413_1-7239790729310.1 Phenylpropanoid CSE low borderline
Pcabscaffold_4610763880.1 Phenylpropanoid CSE low borderline
Pcabscaffold_4640765230.1 Phenylpropanoid CSE medium pass
Pcabscaffold_470774070.1 Phenylpropanoid CSE medium pass
Pcabscaffold_4790782700.1 Phenylpropanoid CSE medium pass
Pcabscaffold_4820787860.1 Phenylpropanoid CSE medium pass