PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
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Gene Pathway Family Confidence Status Best Target
Pcabscaffold_4910793710.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Pcabscaffold_5510849390.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pcabscaffold_5690857550.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pcabscaffold_5750865980.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pcabscaffold_620896880.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Pcabscaffold_630904490.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Pcabscaffold_644_1-5235120912950.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Pcabscaffold_6570920100.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Pcabscaffold_700943190.1 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
Pcabscaffold_7060947240.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pcabscaffold_7280957980.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pcabscaffold_7820990700.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Pcabscaffold_7930996360.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pcabscaffold_7930996460.1 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
Pcabscaffold_7950997770.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Pcabscaffold_7_898318-55986911001130.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pcabscaffold_8291022240.1 Phenylpropanoid CSE low borderline CSE__00002__sp_Q9C942_CSE_ARATH
Pcabscaffold_8331025750.1 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
Pcabscaffold_8331025770.1 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
Pcabscaffold_8561034890.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Pcabscaffold_8631041430.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Pcabscaffold_9221073950.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pcabscaffold_941082590.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pcabscaffold_9421084440.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH