PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
Pcabscaffold_1580249610.1 Flavonoid F3H medium borderline
Pcabscaffold_159_1-16866950256460.1 Flavonoid F3H medium borderline
Pcabscaffold_1600259300.1 Flavonoid F3H medium borderline
Pcabscaffold_16040261070.1 Flavonoid F3H low borderline
Pcabscaffold_1650274090.1 Flavonoid F3H medium borderline
Pcabscaffold_16650277840.1 Flavonoid F3H medium borderline
Pcabscaffold_1670280980.1 Flavonoid F3H low borderline
Pcabscaffold_16740281670.1 Flavonoid F3H medium borderline
Pcabscaffold_16740281680.1 Flavonoid F3H medium borderline
Pcabscaffold_16740281690.1 Flavonoid F3H medium borderline
Pcabscaffold_16740281820.1 Flavonoid F3H medium borderline
Pcabscaffold_16740281830.1 Flavonoid F3H medium borderline
Pcabscaffold_16740281840.1 Flavonoid F3H medium borderline
Pcabscaffold_1680282450.1 Flavonoid F3H medium borderline
Pcabscaffold_16810284160.1 Flavonoid F3H low borderline
Pcabscaffold_16890285460.1 Flavonoid F3H low borderline
Pcabscaffold_169040285940.1 Flavonoid F3H medium borderline
Pcabscaffold_1710291740.1 Flavonoid F3H medium borderline
Pcabscaffold_1710291760.1 Flavonoid F3H medium borderline
Pcabscaffold_1720295090.1 Flavonoid F3H medium borderline
Pcabscaffold_18170325350.1 Flavonoid F3H medium borderline
Pcabscaffold_18200328090.1 Flavonoid F3H medium borderline
Pcabscaffold_1820326250.1 Flavonoid F3H medium borderline
Pcabscaffold_1850333490.1 Flavonoid F3H medium borderline
Pcabscaffold_18780340490.1 Flavonoid F3H medium borderline
Pcabscaffold_18780340530.1 Flavonoid F3H medium borderline
Pcabscaffold_18780340680.1 Flavonoid F3H medium borderline
Pcabscaffold_18780340710.1 Flavonoid F3H medium borderline
Pcabscaffold_18780340720.1 Flavonoid F3H medium borderline
Pcabscaffold_18780340760.1 Flavonoid F3H medium borderline
Pcabscaffold_18930343670.1 Flavonoid F3H medium borderline
Pcabscaffold_18930343680.1 Flavonoid F3H medium borderline
Pcabscaffold_18930343700.1 Flavonoid F3H medium borderline
Pcabscaffold_18930343710.1 Flavonoid F3H medium borderline
Pcabscaffold_18950344030.1 Flavonoid F3H low borderline
Pcabscaffold_19190353590.1 Flavonoid F3H medium borderline
Pcabscaffold_19190353790.1 Flavonoid F3H medium borderline
Pcabscaffold_19690365700.1 Flavonoid F3H medium borderline
Pcabscaffold_1980369440.1 Flavonoid F3H medium borderline
Pcabscaffold_1_1017389-68718490376470.1 Flavonoid F3H medium borderline
Pcabscaffold_20386980.1 Flavonoid F3H medium borderline
Pcabscaffold_2040401760.1 Flavonoid F3H medium pass
Pcabscaffold_20500404380.1 Flavonoid F3H medium borderline
Pcabscaffold_20720410480.1 Flavonoid F3H low borderline
Pcabscaffold_20720410490.1 Flavonoid F3H low borderline
Pcabscaffold_21010418160.1 Flavonoid F3H medium borderline
Pcabscaffold_21770434340.1 Flavonoid F3H medium borderline
Pcabscaffold_220439240.1 Flavonoid F3H low borderline
Pcabscaffold_22300446980.1 Flavonoid F3H medium borderline
Pcabscaffold_230460010.1 Flavonoid F3H low borderline