PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

7526
Candidate Protein Records
5906
Pathway-Level Records
16043
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Protein/Isoform Record Pathway Family Confidence Status
Pcabscaffold_861039230.1 Flavonoid F3H low borderline
Pcabscaffold_861039240.1 Flavonoid F3H medium borderline
Pcabscaffold_8721046790.1 Flavonoid F3H medium borderline
Pcabscaffold_8751047910.1 Flavonoid F3H medium borderline
Pcabscaffold_8801049440.1 Flavonoid F3H medium borderline
Pcabscaffold_88_311528-23538291053330.1 Flavonoid F3H low borderline
Pcabscaffold_901059410.1 Flavonoid F3H medium borderline
Pcabscaffold_901061450.1 Flavonoid F3H medium borderline
Pcabscaffold_921070410.1 Flavonoid F3H medium borderline
Pcabscaffold_9211073490.1 Flavonoid F3H low borderline
Pcabscaffold_941082450.1 Flavonoid F3H low borderline
Pcabscaffold_941082470.1 Flavonoid F3H low borderline
Pcabscaffold_941082480.1 Flavonoid F3H medium borderline
Pcabscaffold_9421084250.1 Flavonoid F3H medium borderline
Pcabscaffold_9471085800.1 Flavonoid F3H medium pass
Pcabscaffold_951086360.1 Flavonoid F3H low borderline
Pcabscaffold_9551088760.1 Flavonoid F3H medium borderline
Pcabscaffold_961091270.1 Flavonoid F3H medium borderline
Pcabscaffold_961092700.1 Flavonoid F3H medium borderline
Pcabscaffold_981099900.1 Flavonoid F3H medium borderline
Pcabscaffold_9_15686-49974061107880.1 Flavonoid F3H medium borderline