PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: FNS
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Gene Pathway Family Confidence Status
Pcabscaffold_3020590910.1 Flavonoid FNS medium borderline
Pcabscaffold_3030591750.1 Flavonoid FNS medium borderline
Pcabscaffold_3140604430.1 Flavonoid FNS medium borderline
Pcabscaffold_3140604720.1 Flavonoid FNS medium borderline
Pcabscaffold_3190611470.1 Flavonoid FNS medium pass
Pcabscaffold_3190611530.1 Flavonoid FNS medium borderline
Pcabscaffold_3380636740.1 Flavonoid FNS medium borderline
Pcabscaffold_3430643720.1 Flavonoid FNS medium borderline
Pcabscaffold_35650657570.1 Flavonoid FNS medium pass
Pcabscaffold_3570657960.1 Flavonoid FNS medium borderline
Pcabscaffold_3570658160.1 Flavonoid FNS medium borderline
Pcabscaffold_380685460.1 Flavonoid FNS medium borderline
Pcabscaffold_383_1-10745670689160.1 Flavonoid FNS medium borderline
Pcabscaffold_383_1-10745670689170.1 Flavonoid FNS medium borderline
Pcabscaffold_4070721610.1 Flavonoid FNS medium borderline
Pcabscaffold_410_430000-7137580727250.1 Flavonoid FNS medium borderline
Pcabscaffold_4170731420.1 Flavonoid FNS low borderline
Pcabscaffold_42730738480.1 Flavonoid FNS medium borderline
Pcabscaffold_4350745800.1 Flavonoid FNS medium borderline
Pcabscaffold_4500757990.1 Flavonoid FNS medium borderline
Pcabscaffold_4810787550.1 Flavonoid FNS low borderline
Pcabscaffold_490_38283-7957460793500.1 Flavonoid FNS medium borderline
Pcabscaffold_4_900905-60197250801710.1 Flavonoid FNS low borderline
Pcabscaffold_4_900905-60197250804260.1 Flavonoid FNS medium borderline
Pcabscaffold_4_900905-60197250804650.1 Flavonoid FNS medium borderline
Pcabscaffold_4_900905-60197250804730.1 Flavonoid FNS medium borderline
Pcabscaffold_5750866450.1 Flavonoid FNS medium borderline
Pcabscaffold_5960877520.1 Flavonoid FNS medium borderline
Pcabscaffold_6110893150.1 Flavonoid FNS medium borderline
Pcabscaffold_6230899730.1 Flavonoid FNS medium borderline
Pcabscaffold_6260900390.1 Flavonoid FNS medium borderline
Pcabscaffold_630904020.1 Flavonoid FNS medium borderline
Pcabscaffold_6390908000.1 Flavonoid FNS low borderline
Pcabscaffold_6530918130.1 Flavonoid FNS medium borderline
Pcabscaffold_670927920.1 Flavonoid FNS medium borderline
Pcabscaffold_6830934910.1 Flavonoid FNS low borderline
Pcabscaffold_710949740.1 Flavonoid FNS low borderline
Pcabscaffold_731_226832-7584620964230.1 Flavonoid FNS medium borderline
Pcabscaffold_7520974720.1 Flavonoid FNS medium borderline
Pcabscaffold_76_1-5972310980780.1 Flavonoid FNS medium pass
Pcabscaffold_77580987040.1 Flavonoid FNS low borderline
Pcabscaffold_7830991170.1 Flavonoid FNS medium borderline
Pcabscaffold_7860992090.1 Flavonoid FNS medium borderline
Pcabscaffold_8411029950.1 Flavonoid FNS medium borderline
Pcabscaffold_88_311528-23538291053320.1 Flavonoid FNS medium pass
Pcabscaffold_89831059210.1 Flavonoid FNS low borderline
Pcabscaffold_9141067580.1 Flavonoid FNS medium borderline
Pcabscaffold_9221074230.1 Flavonoid FNS medium borderline
Pcabscaffold_941082910.1 Flavonoid FNS medium borderline
Pcabscaffold_9561089070.1 Flavonoid FNS medium borderline