PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: FPPS
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Gene Pathway Family Confidence Status
Pcabscaffold_1000011360.1 Terpenoid FPPS low borderline
Pcabscaffold_10360026970.1 Terpenoid FPPS medium pass
Pcabscaffold_1213_187512-4984540097790.1 Terpenoid FPPS medium borderline
Pcabscaffold_12180099190.1 Terpenoid FPPS low borderline
Pcabscaffold_13660163550.1 Terpenoid FPPS medium pass
Pcabscaffold_13980174150.1 Terpenoid FPPS medium pass
Pcabscaffold_150217780.1 Terpenoid FPPS low borderline
Pcabscaffold_15480237800.1 Terpenoid FPPS medium pass
Pcabscaffold_17090291240.1 Terpenoid FPPS medium pass
Pcabscaffold_17740309980.1 Terpenoid FPPS low borderline
Pcabscaffold_17740309990.1 Terpenoid FPPS medium pass
Pcabscaffold_190345980.1 Terpenoid FPPS medium pass
Pcabscaffold_190348340.1 Terpenoid FPPS medium borderline
Pcabscaffold_20500404260.1 Terpenoid FPPS medium pass
Pcabscaffold_230460400.1 Terpenoid FPPS medium pass
Pcabscaffold_23070467330.1 Terpenoid FPPS medium borderline
Pcabscaffold_24140488510.1 Terpenoid FPPS medium borderline
Pcabscaffold_26030519570.1 Terpenoid FPPS medium pass
Pcabscaffold_26530528560.1 Terpenoid FPPS low borderline
Pcabscaffold_2670531290.1 Terpenoid FPPS medium borderline
Pcabscaffold_2720543240.1 Terpenoid FPPS medium borderline
Pcabscaffold_2820556470.1 Terpenoid FPPS medium pass
Pcabscaffold_28370558690.1 Terpenoid FPPS medium pass
Pcabscaffold_28370558710.1 Terpenoid FPPS medium pass
Pcabscaffold_2870563340.1 Terpenoid FPPS medium pass
Pcabscaffold_2910573380.1 Terpenoid FPPS medium pass
Pcabscaffold_3010589010.1 Terpenoid FPPS medium pass
Pcabscaffold_3010589020.1 Terpenoid FPPS medium pass
Pcabscaffold_3190611120.1 Terpenoid FPPS low borderline
Pcabscaffold_35250654780.1 Terpenoid FPPS medium borderline
Pcabscaffold_3530655330.1 Terpenoid FPPS medium pass
Pcabscaffold_37_284008-34862800681400.1 Terpenoid FPPS medium borderline
Pcabscaffold_4190732670.1 Terpenoid FPPS medium borderline
Pcabscaffold_42_1520480-32586700741590.1 Terpenoid FPPS medium borderline
Pcabscaffold_49460796370.1 Terpenoid FPPS medium borderline
Pcabscaffold_5110821070.1 Terpenoid FPPS medium pass
Pcabscaffold_5110821080.1 Terpenoid FPPS medium pass
Pcabscaffold_5220826530.1 Terpenoid FPPS medium pass
Pcabscaffold_5250828900.1 Terpenoid FPPS medium pass
Pcabscaffold_570861360.1 Terpenoid FPPS low borderline
Pcabscaffold_577_1-3513130867000.1 Terpenoid FPPS medium pass
Pcabscaffold_60878670.1 Terpenoid FPPS medium pass
Pcabscaffold_620897470.1 Terpenoid FPPS medium pass
Pcabscaffold_6820934000.1 Terpenoid FPPS medium pass
Pcabscaffold_6820934010.1 Terpenoid FPPS medium pass
Pcabscaffold_6950942290.1 Terpenoid FPPS medium pass
Pcabscaffold_6950942340.1 Terpenoid FPPS medium pass
Pcabscaffold_7730986200.1 Terpenoid FPPS medium borderline
Pcabscaffold_8021006290.1 Terpenoid FPPS medium pass
Pcabscaffold_8391028350.1 Terpenoid FPPS medium pass