PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GES
Reset
Gene Pathway Family Confidence Status
Pcabscaffold_15580241600.1 Alkaloid GES medium pass
Pcabscaffold_159_1-16866950255440.1 Alkaloid GES medium pass
Pcabscaffold_159_1-16866950255450.1 Alkaloid GES low borderline
Pcabscaffold_159_1-16866950255480.1 Alkaloid GES low borderline
Pcabscaffold_160257300.1 Alkaloid GES low borderline
Pcabscaffold_160257310.1 Alkaloid GES medium pass
Pcabscaffold_16380271190.1 Alkaloid GES medium pass
Pcabscaffold_16380271200.1 Alkaloid GES medium pass
Pcabscaffold_16380271210.1 Alkaloid GES medium pass
Pcabscaffold_17110292620.1 Alkaloid GES medium pass
Pcabscaffold_1720294210.1 Alkaloid GES medium pass
Pcabscaffold_17230296060.1 Alkaloid GES medium pass
Pcabscaffold_176_364117-14023400306380.1 Alkaloid GES low borderline
Pcabscaffold_18100324440.1 Alkaloid GES medium pass
Pcabscaffold_1820327740.1 Alkaloid GES medium pass
Pcabscaffold_183_1-15130170330080.1 Alkaloid GES medium pass
Pcabscaffold_183_1-15130170330100.1 Alkaloid GES low borderline
Pcabscaffold_183_1-15130170330110.1 Alkaloid GES medium pass
Pcabscaffold_19280355500.1 Alkaloid GES low borderline
Pcabscaffold_1930356440.1 Alkaloid GES low borderline
Pcabscaffold_19480362050.1 Alkaloid GES medium pass
Pcabscaffold_19550364180.1 Alkaloid GES medium pass
Pcabscaffold_19550364190.1 Alkaloid GES medium pass
Pcabscaffold_19550364210.1 Alkaloid GES medium pass
Pcabscaffold_200389470.1 Alkaloid GES medium pass
Pcabscaffold_200389520.1 Alkaloid GES medium pass
Pcabscaffold_200389530.1 Alkaloid GES medium pass
Pcabscaffold_200389540.1 Alkaloid GES medium pass
Pcabscaffold_200389590.1 Alkaloid GES low borderline
Pcabscaffold_20387670.1 Alkaloid GES medium pass
Pcabscaffold_20387690.1 Alkaloid GES medium pass
Pcabscaffold_2040400970.1 Alkaloid GES medium pass
Pcabscaffold_2040402470.1 Alkaloid GES medium pass
Pcabscaffold_2040402480.1 Alkaloid GES medium pass
Pcabscaffold_2040402490.1 Alkaloid GES medium pass
Pcabscaffold_220_1-13634480441660.1 Alkaloid GES medium pass
Pcabscaffold_220_1-13634480441710.1 Alkaloid GES medium pass
Pcabscaffold_220_1-13634480441750.1 Alkaloid GES medium pass
Pcabscaffold_220_1-13634480441770.1 Alkaloid GES medium pass
Pcabscaffold_220_1-13634480441790.1 Alkaloid GES medium pass
Pcabscaffold_22150443640.1 Alkaloid GES medium pass
Pcabscaffold_22150443660.1 Alkaloid GES medium pass
Pcabscaffold_2250451700.1 Alkaloid GES medium pass
Pcabscaffold_2250451710.1 Alkaloid GES medium pass
Pcabscaffold_230460840.1 Alkaloid GES medium pass
Pcabscaffold_230464460.1 Alkaloid GES medium pass
Pcabscaffold_230464880.1 Alkaloid GES low borderline
Pcabscaffold_23110468440.1 Alkaloid GES medium pass
Pcabscaffold_23110468450.1 Alkaloid GES medium pass
Pcabscaffold_2320469350.1 Alkaloid GES medium pass