PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GES
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Gene Pathway Family Confidence Status
Pcabscaffold_3_2646351-60804880712890.1 Alkaloid GES medium pass
Pcabscaffold_3_2646351-60804880713860.1 Alkaloid GES medium pass
Pcabscaffold_3_2646351-60804880713880.1 Alkaloid GES medium pass
Pcabscaffold_4010715950.1 Alkaloid GES low borderline
Pcabscaffold_4010715960.1 Alkaloid GES medium pass
Pcabscaffold_40_644123-29686580724380.1 Alkaloid GES medium pass
Pcabscaffold_40_644123-29686580724390.1 Alkaloid GES medium pass
Pcabscaffold_40_644123-29686580724400.1 Alkaloid GES medium pass
Pcabscaffold_450756780.1 Alkaloid GES medium pass
Pcabscaffold_450757080.1 Alkaloid GES low borderline
Pcabscaffold_45420760800.1 Alkaloid GES medium pass
Pcabscaffold_4600763270.1 Alkaloid GES medium pass
Pcabscaffold_46_3409044-47502790772310.1 Alkaloid GES medium pass
Pcabscaffold_4760780550.1 Alkaloid GES medium pass
Pcabscaffold_4800786140.1 Alkaloid GES medium pass
Pcabscaffold_480785200.1 Alkaloid GES medium pass
Pcabscaffold_48710791610.1 Alkaloid GES medium pass
Pcabscaffold_4_900905-60197250804270.1 Alkaloid GES low borderline
Pcabscaffold_4_900905-60197250804680.1 Alkaloid GES medium pass
Pcabscaffold_51390822230.1 Alkaloid GES low borderline
Pcabscaffold_514_1-13691320822710.1 Alkaloid GES low borderline
Pcabscaffold_5250828440.1 Alkaloid GES medium pass
Pcabscaffold_52670829720.1 Alkaloid GES low borderline
Pcabscaffold_530830860.1 Alkaloid GES low borderline
Pcabscaffold_530830870.1 Alkaloid GES medium pass
Pcabscaffold_540842270.1 Alkaloid GES low borderline
Pcabscaffold_546380845110.1 Alkaloid GES medium pass
Pcabscaffold_5660856220.1 Alkaloid GES medium pass
Pcabscaffold_5660856250.1 Alkaloid GES medium pass
Pcabscaffold_5660856280.1 Alkaloid GES medium pass
Pcabscaffold_5660856320.1 Alkaloid GES medium pass
Pcabscaffold_5660856340.1 Alkaloid GES medium pass
Pcabscaffold_57600866560.1 Alkaloid GES medium pass
Pcabscaffold_5890874160.1 Alkaloid GES medium pass
Pcabscaffold_59300876930.1 Alkaloid GES medium pass
Pcabscaffold_62400900300.1 Alkaloid GES low borderline
Pcabscaffold_6570920060.1 Alkaloid GES medium pass
Pcabscaffold_6570920080.1 Alkaloid GES medium pass
Pcabscaffold_6680926830.1 Alkaloid GES medium pass
Pcabscaffold_700943360.1 Alkaloid GES medium pass
Pcabscaffold_700943370.1 Alkaloid GES medium pass
Pcabscaffold_700943380.1 Alkaloid GES medium pass
Pcabscaffold_700943450.1 Alkaloid GES medium pass
Pcabscaffold_7070947510.1 Alkaloid GES medium pass
Pcabscaffold_7080947730.1 Alkaloid GES low borderline
Pcabscaffold_731_226832-7584620963700.1 Alkaloid GES low borderline
Pcabscaffold_74_258846-35974070973180.1 Alkaloid GES low borderline
Pcabscaffold_750973500.1 Alkaloid GES low borderline
Pcabscaffold_750973540.1 Alkaloid GES low borderline
Pcabscaffold_750973580.1 Alkaloid GES low borderline