PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
Pcabscaffold_1090048600.1 Alkaloid GS low borderline
Pcabscaffold_114_1103768-21090250072870.1 Alkaloid GS high pass
Pcabscaffold_1150073910.1 Alkaloid GS low borderline
Pcabscaffold_1150074040.1 Alkaloid GS high pass
Pcabscaffold_11730081660.1 Alkaloid GS high pass
Pcabscaffold_123_1686054-19452770107130.1 Alkaloid GS high pass
Pcabscaffold_12590115540.1 Alkaloid GS low borderline
Pcabscaffold_1260117440.1 Alkaloid GS high pass
Pcabscaffold_12790123310.1 Alkaloid GS low borderline
Pcabscaffold_13290147680.1 Alkaloid GS low borderline
Pcabscaffold_1390170660.1 Alkaloid GS low borderline
Pcabscaffold_13970173850.1 Alkaloid GS high pass
Pcabscaffold_13970173900.1 Alkaloid GS high pass
Pcabscaffold_140176160.1 Alkaloid GS high pass
Pcabscaffold_14280188840.1 Alkaloid GS high pass
Pcabscaffold_150216790.1 Alkaloid GS high pass
Pcabscaffold_15260231310.1 Alkaloid GS low borderline
Pcabscaffold_16280268650.1 Alkaloid GS medium pass
Pcabscaffold_1660276910.1 Alkaloid GS low borderline
Pcabscaffold_16610277350.1 Alkaloid GS high pass
Pcabscaffold_1700289050.1 Alkaloid GS medium pass
Pcabscaffold_180318540.1 Alkaloid GS low borderline
Pcabscaffold_180319070.1 Alkaloid GS low borderline
Pcabscaffold_190345320.1 Alkaloid GS low borderline
Pcabscaffold_190345550.1 Alkaloid GS low borderline
Pcabscaffold_190346230.1 Alkaloid GS low borderline
Pcabscaffold_190347170.1 Alkaloid GS low borderline
Pcabscaffold_190347240.1 Alkaloid GS medium pass
Pcabscaffold_190348680.1 Alkaloid GS low borderline
Pcabscaffold_1910351780.1 Alkaloid GS high pass
Pcabscaffold_196_1-14453940366440.1 Alkaloid GS low borderline
Pcabscaffold_20080394940.1 Alkaloid GS low borderline
Pcabscaffold_20260398490.1 Alkaloid GS low borderline
Pcabscaffold_20385990.1 Alkaloid GS high pass
Pcabscaffold_20480404020.1 Alkaloid GS low borderline
Pcabscaffold_20980413720.1 Alkaloid GS low borderline
Pcabscaffold_21580429680.1 Alkaloid GS high pass
Pcabscaffold_22590452540.1 Alkaloid GS high pass
Pcabscaffold_22590452610.1 Alkaloid GS high pass
Pcabscaffold_2290458180.1 Alkaloid GS low borderline
Pcabscaffold_2300465760.1 Alkaloid GS medium pass
Pcabscaffold_23300471740.1 Alkaloid GS high pass
Pcabscaffold_23560475130.1 Alkaloid GS low borderline
Pcabscaffold_24160488720.1 Alkaloid GS medium pass
Pcabscaffold_24570493600.1 Alkaloid GS low borderline
Pcabscaffold_25530506930.1 Alkaloid GS high pass
Pcabscaffold_2640526500.1 Alkaloid GS low borderline
Pcabscaffold_2710541950.1 Alkaloid GS low borderline
Pcabscaffold_2740546530.1 Alkaloid GS medium pass
Pcabscaffold_28490561160.1 Alkaloid GS low borderline