PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
Pcabscaffold_2850561490.1 Alkaloid GS medium pass
Pcabscaffold_29050572640.1 Alkaloid GS high pass
Pcabscaffold_293_1-9211010576360.1 Alkaloid GS low borderline
Pcabscaffold_3170608880.1 Alkaloid GS high pass
Pcabscaffold_3170608940.1 Alkaloid GS high pass
Pcabscaffold_3240619000.1 Alkaloid GS low borderline
Pcabscaffold_33810637810.1 Alkaloid GS low borderline
Pcabscaffold_340641310.1 Alkaloid GS high pass
Pcabscaffold_34720648420.1 Alkaloid GS medium pass
Pcabscaffold_34970650340.1 Alkaloid GS medium pass
Pcabscaffold_35210654610.1 Alkaloid GS low borderline
Pcabscaffold_3550656640.1 Alkaloid GS low borderline
Pcabscaffold_36790669460.1 Alkaloid GS low borderline
Pcabscaffold_3740676920.1 Alkaloid GS low borderline
Pcabscaffold_3840689650.1 Alkaloid GS low borderline
Pcabscaffold_3880693680.1 Alkaloid GS high pass
Pcabscaffold_3_2646351-60804880713150.1 Alkaloid GS low borderline
Pcabscaffold_4050719050.1 Alkaloid GS medium pass
Pcabscaffold_4070721120.1 Alkaloid GS high pass
Pcabscaffold_4550761170.1 Alkaloid GS high pass
Pcabscaffold_4570762140.1 Alkaloid GS high pass
Pcabscaffold_4770781200.1 Alkaloid GS medium pass
Pcabscaffold_47850782200.1 Alkaloid GS medium pass
Pcabscaffold_4940796330.1 Alkaloid GS low borderline
Pcabscaffold_500810980.1 Alkaloid GS low borderline
Pcabscaffold_50808460.1 Alkaloid GS medium pass
Pcabscaffold_5190824910.1 Alkaloid GS low borderline
Pcabscaffold_547_1-8148510845670.1 Alkaloid GS low borderline
Pcabscaffold_5640855630.1 Alkaloid GS medium pass
Pcabscaffold_5900874880.1 Alkaloid GS medium pass
Pcabscaffold_60878570.1 Alkaloid GS low borderline
Pcabscaffold_60879640.1 Alkaloid GS low borderline
Pcabscaffold_60880080.1 Alkaloid GS high pass
Pcabscaffold_60880090.1 Alkaloid GS high pass
Pcabscaffold_60880500.1 Alkaloid GS low borderline
Pcabscaffold_60880890.1 Alkaloid GS high pass
Pcabscaffold_6100892360.1 Alkaloid GS low borderline
Pcabscaffold_620898700.1 Alkaloid GS high pass
Pcabscaffold_620898730.1 Alkaloid GS high pass
Pcabscaffold_6320906500.1 Alkaloid GS medium pass
Pcabscaffold_650916310.1 Alkaloid GS low borderline
Pcabscaffold_6610924580.1 Alkaloid GS high pass
Pcabscaffold_6750930820.1 Alkaloid GS low borderline
Pcabscaffold_6840935320.1 Alkaloid GS high pass
Pcabscaffold_7120952590.1 Alkaloid GS high pass
Pcabscaffold_730962200.1 Alkaloid GS low borderline
Pcabscaffold_730962210.1 Alkaloid GS low borderline
Pcabscaffold_7580976780.1 Alkaloid GS high pass
Pcabscaffold_7600977570.1 Alkaloid GS low borderline
Pcabscaffold_811011980.1 Alkaloid GS high pass