PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
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Gene Pathway Family Confidence Status
Pcabscaffold_10240022540.1 Alkaloid H6H medium pass
Pcabscaffold_102680022790.1 Alkaloid H6H medium borderline
Pcabscaffold_10920049190.1 Alkaloid H6H low borderline
Pcabscaffold_10920049200.1 Alkaloid H6H low borderline
Pcabscaffold_11610077140.1 Alkaloid H6H low borderline
Pcabscaffold_11680079470.1 Alkaloid H6H low borderline
Pcabscaffold_1170080070.1 Alkaloid H6H low borderline
Pcabscaffold_1170080080.1 Alkaloid H6H low borderline
Pcabscaffold_12090096500.1 Alkaloid H6H low borderline
Pcabscaffold_122_1-10734620102820.1 Alkaloid H6H medium pass
Pcabscaffold_1250110330.1 Alkaloid H6H medium borderline
Pcabscaffold_12880126520.1 Alkaloid H6H medium borderline
Pcabscaffold_12_923860-48109350133100.1 Alkaloid H6H low borderline
Pcabscaffold_12_923860-48109350133110.1 Alkaloid H6H low borderline
Pcabscaffold_1350156500.1 Alkaloid H6H medium borderline
Pcabscaffold_14100182690.1 Alkaloid H6H high pass
Pcabscaffold_1450200530.1 Alkaloid H6H medium borderline
Pcabscaffold_14590202500.1 Alkaloid H6H medium borderline
Pcabscaffold_147_1-13211470209370.1 Alkaloid H6H low borderline
Pcabscaffold_15240230700.1 Alkaloid H6H low borderline
Pcabscaffold_15240230710.1 Alkaloid H6H low borderline
Pcabscaffold_1580246890.1 Alkaloid H6H low borderline
Pcabscaffold_1580249610.1 Alkaloid H6H low borderline
Pcabscaffold_16040261070.1 Alkaloid H6H low borderline
Pcabscaffold_16650277840.1 Alkaloid H6H medium borderline
Pcabscaffold_16740281670.1 Alkaloid H6H low borderline
Pcabscaffold_16740281690.1 Alkaloid H6H medium pass
Pcabscaffold_16740281820.1 Alkaloid H6H medium pass
Pcabscaffold_16740281830.1 Alkaloid H6H medium borderline
Pcabscaffold_1680282450.1 Alkaloid H6H medium borderline
Pcabscaffold_16890285460.1 Alkaloid H6H low borderline
Pcabscaffold_169040285940.1 Alkaloid H6H low borderline
Pcabscaffold_17700309080.1 Alkaloid H6H low borderline
Pcabscaffold_18020322220.1 Alkaloid H6H low borderline
Pcabscaffold_18170325350.1 Alkaloid H6H medium borderline
Pcabscaffold_1850334190.1 Alkaloid H6H low borderline
Pcabscaffold_18780340530.1 Alkaloid H6H low borderline
Pcabscaffold_18780340730.1 Alkaloid H6H low borderline
Pcabscaffold_18950344030.1 Alkaloid H6H medium pass
Pcabscaffold_19190353790.1 Alkaloid H6H medium borderline
Pcabscaffold_19330357820.1 Alkaloid H6H low borderline
Pcabscaffold_1980369440.1 Alkaloid H6H medium borderline
Pcabscaffold_2040401760.1 Alkaloid H6H low borderline
Pcabscaffold_20720410480.1 Alkaloid H6H low borderline
Pcabscaffold_20720410490.1 Alkaloid H6H low borderline
Pcabscaffold_2100417880.1 Alkaloid H6H low borderline
Pcabscaffold_25580507220.1 Alkaloid H6H low borderline
Pcabscaffold_25650509630.1 Alkaloid H6H medium borderline
Pcabscaffold_25880512420.1 Alkaloid H6H medium borderline
Pcabscaffold_25_430986-37583860515540.1 Alkaloid H6H low borderline