PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
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Gene Pathway Family Confidence Status
Pcabscaffold_25_430986-37583860515550.1 Alkaloid H6H low borderline
Pcabscaffold_25_430986-37583860515560.1 Alkaloid H6H low borderline
Pcabscaffold_25_430986-37583860515570.1 Alkaloid H6H low borderline
Pcabscaffold_25_430986-37583860516570.1 Alkaloid H6H low borderline
Pcabscaffold_26090519980.1 Alkaloid H6H medium borderline
Pcabscaffold_2610520040.1 Alkaloid H6H medium borderline
Pcabscaffold_266160529240.1 Alkaloid H6H low borderline
Pcabscaffold_2770551730.1 Alkaloid H6H low borderline
Pcabscaffold_2840560210.1 Alkaloid H6H low borderline
Pcabscaffold_28700563660.1 Alkaloid H6H low borderline
Pcabscaffold_28700563690.1 Alkaloid H6H medium borderline
Pcabscaffold_28700563720.1 Alkaloid H6H low borderline
Pcabscaffold_30620594630.1 Alkaloid H6H low borderline
Pcabscaffold_3130604100.1 Alkaloid H6H low borderline
Pcabscaffold_3390638610.1 Alkaloid H6H low borderline
Pcabscaffold_350651510.1 Alkaloid H6H low borderline
Pcabscaffold_360661930.1 Alkaloid H6H medium pass
Pcabscaffold_37280676130.1 Alkaloid H6H low borderline
Pcabscaffold_3800686390.1 Alkaloid H6H low borderline
Pcabscaffold_381_1-3498320687200.1 Alkaloid H6H medium borderline
Pcabscaffold_3_2646351-60804880710320.1 Alkaloid H6H low borderline
Pcabscaffold_40_644123-29686580725420.1 Alkaloid H6H low borderline
Pcabscaffold_410725880.1 Alkaloid H6H low borderline
Pcabscaffold_4170730660.1 Alkaloid H6H low borderline
Pcabscaffold_4430752130.1 Alkaloid H6H low borderline
Pcabscaffold_4450752620.1 Alkaloid H6H low borderline
Pcabscaffold_46_1-34069640770290.1 Alkaloid H6H high pass
Pcabscaffold_46_1-34069640770300.1 Alkaloid H6H high pass
Pcabscaffold_46_1-34069640770360.1 Alkaloid H6H medium pass
Pcabscaffold_46_1-34069640770850.1 Alkaloid H6H high pass
Pcabscaffold_46_1-34069640770890.1 Alkaloid H6H high pass
Pcabscaffold_46_1-34069640770970.1 Alkaloid H6H medium pass
Pcabscaffold_4730778240.1 Alkaloid H6H medium pass
Pcabscaffold_4740779370.1 Alkaloid H6H high pass
Pcabscaffold_4910793850.1 Alkaloid H6H low borderline
Pcabscaffold_4910793860.1 Alkaloid H6H low borderline
Pcabscaffold_4910793870.1 Alkaloid H6H low borderline
Pcabscaffold_4910793880.1 Alkaloid H6H low borderline
Pcabscaffold_4910793890.1 Alkaloid H6H low borderline
Pcabscaffold_4_900905-60197250801490.1 Alkaloid H6H medium borderline
Pcabscaffold_500810090.1 Alkaloid H6H medium borderline
Pcabscaffold_5130821990.1 Alkaloid H6H low borderline
Pcabscaffold_530831310.1 Alkaloid H6H low borderline
Pcabscaffold_5340837180.1 Alkaloid H6H low borderline
Pcabscaffold_570861240.1 Alkaloid H6H medium borderline
Pcabscaffold_5750866150.1 Alkaloid H6H low borderline
Pcabscaffold_5790867990.1 Alkaloid H6H low borderline
Pcabscaffold_610890800.1 Alkaloid H6H medium borderline
Pcabscaffold_630904590.1 Alkaloid H6H low borderline
Pcabscaffold_630904600.1 Alkaloid H6H low borderline