PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: HCT
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Gene Pathway Family Confidence Status
Pcabscaffold_10040015330.1 Phenylpropanoid HCT medium pass
Pcabscaffold_10310025790.1 Phenylpropanoid HCT low borderline
Pcabscaffold_10700042720.1 Phenylpropanoid HCT low borderline
Pcabscaffold_10880048160.1 Phenylpropanoid HCT medium pass
Pcabscaffold_11270062880.1 Phenylpropanoid HCT low borderline
Pcabscaffold_11590076040.1 Phenylpropanoid HCT low borderline
Pcabscaffold_11640078510.1 Phenylpropanoid HCT low borderline
Pcabscaffold_11640078520.1 Phenylpropanoid HCT low borderline
Pcabscaffold_12000094820.1 Phenylpropanoid HCT low borderline
Pcabscaffold_123_1-16801630106710.1 Phenylpropanoid HCT medium pass
Pcabscaffold_126780120060.1 Phenylpropanoid HCT low borderline
Pcabscaffold_12700121650.1 Phenylpropanoid HCT low borderline
Pcabscaffold_12700121660.1 Phenylpropanoid HCT low borderline
Pcabscaffold_13080141070.1 Phenylpropanoid HCT low borderline
Pcabscaffold_13800167990.1 Phenylpropanoid HCT low borderline
Pcabscaffold_1430189720.1 Phenylpropanoid HCT medium pass
Pcabscaffold_1430189730.1 Phenylpropanoid HCT medium pass
Pcabscaffold_1430189740.1 Phenylpropanoid HCT medium pass
Pcabscaffold_1430189760.1 Phenylpropanoid HCT medium pass
Pcabscaffold_1430189770.1 Phenylpropanoid HCT medium pass
Pcabscaffold_1430189780.1 Phenylpropanoid HCT medium pass
Pcabscaffold_1430189790.1 Phenylpropanoid HCT medium pass
Pcabscaffold_1430189800.1 Phenylpropanoid HCT low borderline
Pcabscaffold_1430189830.1 Phenylpropanoid HCT medium pass
Pcabscaffold_1430189840.1 Phenylpropanoid HCT medium pass
Pcabscaffold_14820212840.1 Phenylpropanoid HCT low borderline
Pcabscaffold_150218470.1 Phenylpropanoid HCT low borderline
Pcabscaffold_1580248220.1 Phenylpropanoid HCT low borderline
Pcabscaffold_15950254410.1 Phenylpropanoid HCT medium pass
Pcabscaffold_16270268440.1 Phenylpropanoid HCT medium pass
Pcabscaffold_16410272780.1 Phenylpropanoid HCT medium pass
Pcabscaffold_1670279620.1 Phenylpropanoid HCT low borderline
Pcabscaffold_17660305370.1 Phenylpropanoid HCT low borderline
Pcabscaffold_187520340160.1 Phenylpropanoid HCT low borderline
Pcabscaffold_19390358710.1 Phenylpropanoid HCT medium pass
Pcabscaffold_19910372270.1 Phenylpropanoid HCT low borderline
Pcabscaffold_1_1017389-68718490376090.1 Phenylpropanoid HCT low borderline
Pcabscaffold_1_1017389-68718490376110.1 Phenylpropanoid HCT medium pass
Pcabscaffold_1_1017389-68718490376650.1 Phenylpropanoid HCT low borderline
Pcabscaffold_1_1017389-68718490376660.1 Phenylpropanoid HCT medium pass
Pcabscaffold_1_1017389-68718490378700.1 Phenylpropanoid HCT medium pass
Pcabscaffold_20100396030.1 Phenylpropanoid HCT medium pass
Pcabscaffold_205_1-13483090406120.1 Phenylpropanoid HCT low borderline
Pcabscaffold_21250423510.1 Phenylpropanoid HCT medium pass
Pcabscaffold_21250423530.1 Phenylpropanoid HCT medium pass
Pcabscaffold_21250423560.1 Phenylpropanoid HCT medium pass
Pcabscaffold_21250423570.1 Phenylpropanoid HCT medium pass
Pcabscaffold_21250423580.1 Phenylpropanoid HCT medium pass
Pcabscaffold_21250423590.1 Phenylpropanoid HCT medium pass
Pcabscaffold_21250423600.1 Phenylpropanoid HCT medium pass