PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFR
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Gene Pathway Family Confidence Status
Pcabscaffold_1000012560.1 Flavonoid IFR low borderline
Pcabscaffold_100010200.1 Flavonoid IFR medium pass
Pcabscaffold_10540032680.1 Flavonoid IFR low borderline
Pcabscaffold_11030053490.1 Flavonoid IFR low borderline
Pcabscaffold_11460070550.1 Flavonoid IFR low borderline
Pcabscaffold_114_1-11005400072340.1 Flavonoid IFR low borderline
Pcabscaffold_1150073940.1 Flavonoid IFR low borderline
Pcabscaffold_1163_1-1526770078270.1 Flavonoid IFR medium pass
Pcabscaffold_11730081640.1 Flavonoid IFR medium pass
Pcabscaffold_1200093240.1 Flavonoid IFR low borderline
Pcabscaffold_1200093580.1 Flavonoid IFR low borderline
Pcabscaffold_122150099910.1 Flavonoid IFR low borderline
Pcabscaffold_12230100590.1 Flavonoid IFR low borderline
Pcabscaffold_12230100720.1 Flavonoid IFR low borderline
Pcabscaffold_123_1686054-19452770107110.1 Flavonoid IFR medium pass
Pcabscaffold_1250111510.1 Flavonoid IFR high pass
Pcabscaffold_12620118990.1 Flavonoid IFR low borderline
Pcabscaffold_13010139190.1 Flavonoid IFR medium pass
Pcabscaffold_13690164250.1 Flavonoid IFR low borderline
Pcabscaffold_140176290.1 Flavonoid IFR low borderline
Pcabscaffold_14300190910.1 Flavonoid IFR low borderline
Pcabscaffold_143540191800.1 Flavonoid IFR low borderline
Pcabscaffold_1440193840.1 Flavonoid IFR low borderline
Pcabscaffold_146870204880.1 Flavonoid IFR low borderline
Pcabscaffold_14780207770.1 Flavonoid IFR low borderline
Pcabscaffold_1500220080.1 Flavonoid IFR low borderline
Pcabscaffold_15480237670.1 Flavonoid IFR low borderline
Pcabscaffold_1550238690.1 Flavonoid IFR low borderline
Pcabscaffold_1550239170.1 Flavonoid IFR high pass
Pcabscaffold_1550239180.1 Flavonoid IFR medium pass
Pcabscaffold_1600258520.1 Flavonoid IFR low borderline
Pcabscaffold_16020260710.1 Flavonoid IFR low borderline
Pcabscaffold_16110262360.1 Flavonoid IFR high pass
Pcabscaffold_16290268950.1 Flavonoid IFR low borderline
Pcabscaffold_17090291110.1 Flavonoid IFR low borderline
Pcabscaffold_17190293430.1 Flavonoid IFR low borderline
Pcabscaffold_1770307800.1 Flavonoid IFR low borderline
Pcabscaffold_180317780.1 Flavonoid IFR low borderline
Pcabscaffold_180318810.1 Flavonoid IFR low borderline
Pcabscaffold_180319590.1 Flavonoid IFR low borderline
Pcabscaffold_183_1-15130170331660.1 Flavonoid IFR low borderline
Pcabscaffold_190346760.1 Flavonoid IFR low borderline
Pcabscaffold_19220354620.1 Flavonoid IFR low borderline
Pcabscaffold_20387160.1 Flavonoid IFR low borderline
Pcabscaffold_20387640.1 Flavonoid IFR low borderline
Pcabscaffold_20387650.1 Flavonoid IFR high pass
Pcabscaffold_210417450.1 Flavonoid IFR high pass
Pcabscaffold_21490427990.1 Flavonoid IFR high pass
Pcabscaffold_2150428300.1 Flavonoid IFR low borderline
Pcabscaffold_2150428310.1 Flavonoid IFR medium pass