PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFR
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Gene Pathway Family Confidence Status
Pcabscaffold_50920817640.1 Flavonoid IFR low borderline
Pcabscaffold_510817940.1 Flavonoid IFR high pass
Pcabscaffold_5430844050.1 Flavonoid IFR low borderline
Pcabscaffold_5680856720.1 Flavonoid IFR low borderline
Pcabscaffold_570862460.1 Flavonoid IFR low borderline
Pcabscaffold_6020884500.1 Flavonoid IFR low borderline
Pcabscaffold_60879440.1 Flavonoid IFR low borderline
Pcabscaffold_60880100.1 Flavonoid IFR low borderline
Pcabscaffold_60880490.1 Flavonoid IFR low borderline
Pcabscaffold_620897330.1 Flavonoid IFR low borderline
Pcabscaffold_6260900370.1 Flavonoid IFR low borderline
Pcabscaffold_6520917910.1 Flavonoid IFR low borderline
Pcabscaffold_6700928550.1 Flavonoid IFR low borderline
Pcabscaffold_6830934500.1 Flavonoid IFR low borderline
Pcabscaffold_6830934800.1 Flavonoid IFR medium pass
Pcabscaffold_6840935180.1 Flavonoid IFR low borderline
Pcabscaffold_6910940380.1 Flavonoid IFR low borderline
Pcabscaffold_6910940620.1 Flavonoid IFR low borderline
Pcabscaffold_6910940820.1 Flavonoid IFR high pass
Pcabscaffold_6910940850.1 Flavonoid IFR medium pass
Pcabscaffold_710948380.1 Flavonoid IFR low borderline
Pcabscaffold_710949090.1 Flavonoid IFR low borderline
Pcabscaffold_710949850.1 Flavonoid IFR medium pass
Pcabscaffold_710950140.1 Flavonoid IFR low borderline
Pcabscaffold_710950370.1 Flavonoid IFR low borderline
Pcabscaffold_710950530.1 Flavonoid IFR high pass
Pcabscaffold_710950550.1 Flavonoid IFR medium pass
Pcabscaffold_730961070.1 Flavonoid IFR low borderline
Pcabscaffold_7340964590.1 Flavonoid IFR high pass
Pcabscaffold_7340964630.1 Flavonoid IFR high pass
Pcabscaffold_7560976070.1 Flavonoid IFR high pass
Pcabscaffold_7560976080.1 Flavonoid IFR medium pass
Pcabscaffold_7580976820.1 Flavonoid IFR low borderline
Pcabscaffold_7710985340.1 Flavonoid IFR low borderline
Pcabscaffold_7950997380.1 Flavonoid IFR low borderline
Pcabscaffold_8061008000.1 Flavonoid IFR low borderline
Pcabscaffold_81004140.1 Flavonoid IFR high pass
Pcabscaffold_8471031790.1 Flavonoid IFR low borderline
Pcabscaffold_8561034900.1 Flavonoid IFR low borderline
Pcabscaffold_8731046950.1 Flavonoid IFR low borderline
Pcabscaffold_8961057750.1 Flavonoid IFR low borderline
Pcabscaffold_9141067400.1 Flavonoid IFR low borderline
Pcabscaffold_961091430.1 Flavonoid IFR high pass
Pcabscaffold_961091440.1 Flavonoid IFR high pass