PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
Pcabscaffold_0_1653057-107288310004250.1 Alkaloid IO low borderline
Pcabscaffold_0_1653057-107288310005350.1 Alkaloid IO medium pass
Pcabscaffold_0_1653057-107288310005370.1 Alkaloid IO medium pass
Pcabscaffold_0_1653057-107288310005750.1 Alkaloid IO medium borderline
Pcabscaffold_100009390.1 Alkaloid IO medium borderline
Pcabscaffold_10230022020.1 Alkaloid IO medium borderline
Pcabscaffold_10450029500.1 Alkaloid IO medium borderline
Pcabscaffold_105_81081-20652500034610.1 Alkaloid IO medium borderline
Pcabscaffold_10770044580.1 Alkaloid IO medium borderline
Pcabscaffold_1110057340.1 Alkaloid IO low borderline
Pcabscaffold_11140059260.1 Alkaloid IO low borderline
Pcabscaffold_1130065930.1 Alkaloid IO medium borderline
Pcabscaffold_12300103620.1 Alkaloid IO medium borderline
Pcabscaffold_123680105390.1 Alkaloid IO medium pass
Pcabscaffold_1250110950.1 Alkaloid IO medium borderline
Pcabscaffold_1250110960.1 Alkaloid IO medium borderline
Pcabscaffold_1280124020.1 Alkaloid IO low borderline
Pcabscaffold_1280124080.1 Alkaloid IO medium borderline
Pcabscaffold_13180143500.1 Alkaloid IO low borderline
Pcabscaffold_13180143510.1 Alkaloid IO low borderline
Pcabscaffold_1350156780.1 Alkaloid IO low borderline
Pcabscaffold_13580158660.1 Alkaloid IO medium borderline
Pcabscaffold_1360161800.1 Alkaloid IO low borderline
Pcabscaffold_14610203110.1 Alkaloid IO medium borderline
Pcabscaffold_14610203160.1 Alkaloid IO medium borderline
Pcabscaffold_1480211390.1 Alkaloid IO medium borderline
Pcabscaffold_1480211870.1 Alkaloid IO low borderline
Pcabscaffold_1550238560.1 Alkaloid IO low borderline
Pcabscaffold_1560242940.1 Alkaloid IO medium borderline
Pcabscaffold_1600259200.1 Alkaloid IO low borderline
Pcabscaffold_161_179220-17084620265560.1 Alkaloid IO medium borderline
Pcabscaffold_16460273460.1 Alkaloid IO medium borderline
Pcabscaffold_1660276590.1 Alkaloid IO medium borderline
Pcabscaffold_16650277800.1 Alkaloid IO medium borderline
Pcabscaffold_16650277810.1 Alkaloid IO medium borderline
Pcabscaffold_16860285080.1 Alkaloid IO medium borderline
Pcabscaffold_16950286590.1 Alkaloid IO medium borderline
Pcabscaffold_16950286600.1 Alkaloid IO medium borderline
Pcabscaffold_169_1-5014340287950.1 Alkaloid IO medium borderline
Pcabscaffold_1700288920.1 Alkaloid IO medium borderline
Pcabscaffold_17620304670.1 Alkaloid IO medium borderline
Pcabscaffold_1810323750.1 Alkaloid IO medium borderline
Pcabscaffold_18470332420.1 Alkaloid IO low borderline
Pcabscaffold_1970366470.1 Alkaloid IO low borderline
Pcabscaffold_1970366700.1 Alkaloid IO low borderline
Pcabscaffold_1980369200.1 Alkaloid IO medium borderline
Pcabscaffold_1980369210.1 Alkaloid IO low borderline
Pcabscaffold_1980369220.1 Alkaloid IO high pass
Pcabscaffold_2000393620.1 Alkaloid IO medium borderline
Pcabscaffold_20450403620.1 Alkaloid IO medium borderline