PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
Pcabscaffold_20490404180.1 Alkaloid IO medium borderline
Pcabscaffold_213_1-10435660425640.1 Alkaloid IO low borderline
Pcabscaffold_213_1048694-11545650425720.1 Alkaloid IO low borderline
Pcabscaffold_2140426310.1 Alkaloid IO medium borderline
Pcabscaffold_2140426330.1 Alkaloid IO medium borderline
Pcabscaffold_22070440890.1 Alkaloid IO low borderline
Pcabscaffold_220_1-13634480442130.1 Alkaloid IO low borderline
Pcabscaffold_22150443680.1 Alkaloid IO medium borderline
Pcabscaffold_22180444060.1 Alkaloid IO low borderline
Pcabscaffold_22860457730.1 Alkaloid IO medium borderline
Pcabscaffold_230463900.1 Alkaloid IO medium borderline
Pcabscaffold_240482520.1 Alkaloid IO medium borderline
Pcabscaffold_240484400.1 Alkaloid IO medium borderline
Pcabscaffold_24410492290.1 Alkaloid IO low borderline
Pcabscaffold_2480496460.1 Alkaloid IO low borderline
Pcabscaffold_2480496620.1 Alkaloid IO low borderline
Pcabscaffold_25360504310.1 Alkaloid IO medium borderline
Pcabscaffold_25360504320.1 Alkaloid IO medium borderline
Pcabscaffold_25360504330.1 Alkaloid IO medium borderline
Pcabscaffold_25_430986-37583860514920.1 Alkaloid IO medium borderline
Pcabscaffold_2650527970.1 Alkaloid IO medium borderline
Pcabscaffold_26780532080.1 Alkaloid IO medium borderline
Pcabscaffold_2700540940.1 Alkaloid IO medium borderline
Pcabscaffold_27040541400.1 Alkaloid IO medium pass
Pcabscaffold_270540260.1 Alkaloid IO medium borderline
Pcabscaffold_27180542990.1 Alkaloid IO low borderline
Pcabscaffold_27180543010.1 Alkaloid IO low borderline
Pcabscaffold_2730544780.1 Alkaloid IO medium borderline
Pcabscaffold_2840559720.1 Alkaloid IO medium borderline
Pcabscaffold_291510574650.1 Alkaloid IO low borderline
Pcabscaffold_29_1-33670660583580.1 Alkaloid IO low borderline
Pcabscaffold_32380618760.1 Alkaloid IO medium borderline
Pcabscaffold_32380618770.1 Alkaloid IO medium borderline
Pcabscaffold_32430619480.1 Alkaloid IO medium borderline
Pcabscaffold_3260621430.1 Alkaloid IO medium borderline
Pcabscaffold_34510646670.1 Alkaloid IO low borderline
Pcabscaffold_3490650060.1 Alkaloid IO medium borderline
Pcabscaffold_350650920.1 Alkaloid IO low borderline
Pcabscaffold_350650970.1 Alkaloid IO medium borderline
Pcabscaffold_3510652930.1 Alkaloid IO low borderline
Pcabscaffold_3540656050.1 Alkaloid IO low borderline
Pcabscaffold_3550656650.1 Alkaloid IO medium borderline
Pcabscaffold_3550656690.1 Alkaloid IO medium borderline
Pcabscaffold_3660668670.1 Alkaloid IO medium borderline
Pcabscaffold_37100674690.1 Alkaloid IO medium borderline
Pcabscaffold_3720675590.1 Alkaloid IO medium borderline
Pcabscaffold_381_1-3498320687440.1 Alkaloid IO medium borderline
Pcabscaffold_381_1-3498320687450.1 Alkaloid IO medium borderline
Pcabscaffold_381_1-3498320687460.1 Alkaloid IO medium borderline
Pcabscaffold_383_1-10745670688920.1 Alkaloid IO medium borderline