PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
Pcabscaffold_3_1-26455000709200.1 Alkaloid IO medium borderline
Pcabscaffold_40850722790.1 Alkaloid IO medium borderline
Pcabscaffold_42370736230.1 Alkaloid IO medium borderline
Pcabscaffold_42780738540.1 Alkaloid IO medium borderline
Pcabscaffold_470775560.1 Alkaloid IO medium borderline
Pcabscaffold_4710777160.1 Alkaloid IO low borderline
Pcabscaffold_4740778980.1 Alkaloid IO medium borderline
Pcabscaffold_4990797490.1 Alkaloid IO medium borderline
Pcabscaffold_4_900905-60197250805310.1 Alkaloid IO medium borderline
Pcabscaffold_500809830.1 Alkaloid IO medium borderline
Pcabscaffold_500811970.1 Alkaloid IO medium borderline
Pcabscaffold_5070816590.1 Alkaloid IO medium borderline
Pcabscaffold_5380838300.1 Alkaloid IO medium borderline
Pcabscaffold_5570852330.1 Alkaloid IO medium borderline
Pcabscaffold_5570852340.1 Alkaloid IO medium borderline
Pcabscaffold_5570852350.1 Alkaloid IO medium borderline
Pcabscaffold_5570852360.1 Alkaloid IO medium borderline
Pcabscaffold_5570852370.1 Alkaloid IO medium borderline
Pcabscaffold_5630855230.1 Alkaloid IO medium borderline
Pcabscaffold_5630855240.1 Alkaloid IO medium borderline
Pcabscaffold_5630855250.1 Alkaloid IO medium borderline
Pcabscaffold_5630855260.1 Alkaloid IO medium borderline
Pcabscaffold_5630855270.1 Alkaloid IO medium borderline
Pcabscaffold_5640855500.1 Alkaloid IO medium borderline
Pcabscaffold_5640855580.1 Alkaloid IO medium borderline
Pcabscaffold_5640855590.1 Alkaloid IO medium borderline
Pcabscaffold_576_58064-6507780866730.1 Alkaloid IO medium borderline
Pcabscaffold_6110893200.1 Alkaloid IO medium borderline
Pcabscaffold_6230899720.1 Alkaloid IO medium borderline
Pcabscaffold_6230899870.1 Alkaloid IO medium borderline
Pcabscaffold_6260901020.1 Alkaloid IO low borderline
Pcabscaffold_6390908010.1 Alkaloid IO medium borderline
Pcabscaffold_6620924890.1 Alkaloid IO medium borderline
Pcabscaffold_6870936280.1 Alkaloid IO medium borderline
Pcabscaffold_7170953650.1 Alkaloid IO medium borderline
Pcabscaffold_7380966260.1 Alkaloid IO medium borderline
Pcabscaffold_7680979890.1 Alkaloid IO low borderline
Pcabscaffold_77580987040.1 Alkaloid IO low borderline
Pcabscaffold_81002600.1 Alkaloid IO low borderline
Pcabscaffold_8361027020.1 Alkaloid IO low borderline
Pcabscaffold_8501032500.1 Alkaloid IO medium borderline
Pcabscaffold_861038160.1 Alkaloid IO medium borderline
Pcabscaffold_89831059210.1 Alkaloid IO low borderline
Pcabscaffold_9191069120.1 Alkaloid IO low borderline
Pcabscaffold_941082810.1 Alkaloid IO medium borderline
Pcabscaffold_941082850.1 Alkaloid IO medium borderline
Pcabscaffold_941082890.1 Alkaloid IO medium borderline
Pcabscaffold_941083230.1 Alkaloid IO medium borderline
Pcabscaffold_9511087570.1 Alkaloid IO medium borderline
Pcabscaffold_961091940.1 Alkaloid IO medium borderline