PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Gene Pathway Family Confidence Status Best Target
Pcabscaffold_48460789740.1 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pcabscaffold_4850790430.1 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pcabscaffold_4850790460.1 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pcabscaffold_4_900905-60197250801000.1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Pcabscaffold_500811660.1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Pcabscaffold_500811670.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Pcabscaffold_500812530.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Pcabscaffold_570861610.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Pcabscaffold_570861830.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pcabscaffold_570861840.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pcabscaffold_570861860.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pcabscaffold_570862380.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Pcabscaffold_570862430.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Pcabscaffold_6260900650.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Pcabscaffold_660922970.1 Phenylpropanoid LAC low borderline LAC__00002__sp_O81081_LAC2_ARATH
Pcabscaffold_7180954010.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Pcabscaffold_7180954020.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Pcabscaffold_7220955710.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pcabscaffold_731_226832-7584620964200.1 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pcabscaffold_7560976090.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Pcabscaffold_7560976100.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Pcabscaffold_790993420.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Pcabscaffold_8051006790.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Pcabscaffold_8051007030.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pcabscaffold_8051007040.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pcabscaffold_8051007060.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pcabscaffold_8061007740.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Pcabscaffold_871044490.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Pcabscaffold_8911056040.1 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pcabscaffold_8981058600.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Pcabscaffold_8981058810.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pcabscaffold_8981058820.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pcabscaffold_8981058830.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pcabscaffold_8981058850.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pcabscaffold_901060210.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Pcabscaffold_901060220.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Pcabscaffold_9031063060.1 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH