PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
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Gene Pathway Family Confidence Status
Pcabscaffold_10210021630.1 Flavonoid PAL medium pass
Pcabscaffold_10310025840.1 Flavonoid PAL low borderline
Pcabscaffold_10620037720.1 Flavonoid PAL high pass
Pcabscaffold_112_419008-19102860063890.1 Flavonoid PAL low borderline
Pcabscaffold_1200094110.1 Flavonoid PAL medium pass
Pcabscaffold_1200094120.1 Flavonoid PAL high pass
Pcabscaffold_1200094130.1 Flavonoid PAL medium pass
Pcabscaffold_1390171190.1 Flavonoid PAL medium pass
Pcabscaffold_1400177810.1 Flavonoid PAL high pass
Pcabscaffold_1620266250.1 Flavonoid PAL high pass
Pcabscaffold_1620266260.1 Flavonoid PAL medium pass
Pcabscaffold_1620266270.1 Flavonoid PAL high pass
Pcabscaffold_17610304580.1 Flavonoid PAL medium pass
Pcabscaffold_18320329240.1 Flavonoid PAL low borderline
Pcabscaffold_18370329750.1 Flavonoid PAL medium pass
Pcabscaffold_18560335560.1 Flavonoid PAL medium pass
Pcabscaffold_19370358160.1 Flavonoid PAL medium pass
Pcabscaffold_20570405740.1 Flavonoid PAL medium pass
Pcabscaffold_20570405750.1 Flavonoid PAL high pass
Pcabscaffold_20570405760.1 Flavonoid PAL medium pass
Pcabscaffold_20570405770.1 Flavonoid PAL high pass
Pcabscaffold_2060408020.1 Flavonoid PAL medium pass
Pcabscaffold_220_1-13634480441510.1 Flavonoid PAL low borderline
Pcabscaffold_22450450640.1 Flavonoid PAL low borderline
Pcabscaffold_2310467990.1 Flavonoid PAL medium pass
Pcabscaffold_24730495840.1 Flavonoid PAL high pass
Pcabscaffold_3150605880.1 Flavonoid PAL high pass
Pcabscaffold_3150605890.1 Flavonoid PAL high pass
Pcabscaffold_32040615780.1 Flavonoid PAL high pass
Pcabscaffold_33820637880.1 Flavonoid PAL low borderline
Pcabscaffold_35220654650.1 Flavonoid PAL medium pass
Pcabscaffold_35220654660.1 Flavonoid PAL low borderline
Pcabscaffold_36290666020.1 Flavonoid PAL medium pass
Pcabscaffold_36290666030.1 Flavonoid PAL medium pass
Pcabscaffold_590874440.1 Flavonoid PAL medium pass
Pcabscaffold_60_1-13294730887380.1 Flavonoid PAL high pass
Pcabscaffold_60_1-13294730887390.1 Flavonoid PAL medium pass
Pcabscaffold_6620925000.1 Flavonoid PAL low borderline
Pcabscaffold_7400966830.1 Flavonoid PAL high pass
Pcabscaffold_7400966840.1 Flavonoid PAL high pass
Pcabscaffold_7400966850.1 Flavonoid PAL medium pass
Pcabscaffold_831022610.1 Flavonoid PAL medium pass
Pcabscaffold_831022620.1 Flavonoid PAL high pass
Pcabscaffold_831024430.1 Flavonoid PAL medium pass
Pcabscaffold_10210021630.1 Phenylpropanoid PAL medium pass
Pcabscaffold_10310025840.1 Phenylpropanoid PAL low borderline
Pcabscaffold_10620037720.1 Phenylpropanoid PAL high pass
Pcabscaffold_112_419008-19102860063890.1 Phenylpropanoid PAL low borderline
Pcabscaffold_1200094110.1 Phenylpropanoid PAL medium pass
Pcabscaffold_1200094120.1 Phenylpropanoid PAL high pass