PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
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Gene Pathway Family Confidence Status
Pcabscaffold_1200094130.1 Phenylpropanoid PAL medium pass
Pcabscaffold_1390171190.1 Phenylpropanoid PAL medium pass
Pcabscaffold_1400177810.1 Phenylpropanoid PAL high pass
Pcabscaffold_1620266250.1 Phenylpropanoid PAL high pass
Pcabscaffold_1620266260.1 Phenylpropanoid PAL medium pass
Pcabscaffold_1620266270.1 Phenylpropanoid PAL high pass
Pcabscaffold_17610304580.1 Phenylpropanoid PAL medium pass
Pcabscaffold_18320329240.1 Phenylpropanoid PAL low borderline
Pcabscaffold_18370329750.1 Phenylpropanoid PAL medium pass
Pcabscaffold_18560335560.1 Phenylpropanoid PAL medium pass
Pcabscaffold_19370358160.1 Phenylpropanoid PAL medium pass
Pcabscaffold_20570405740.1 Phenylpropanoid PAL medium pass
Pcabscaffold_20570405750.1 Phenylpropanoid PAL high pass
Pcabscaffold_20570405760.1 Phenylpropanoid PAL medium pass
Pcabscaffold_20570405770.1 Phenylpropanoid PAL high pass
Pcabscaffold_2060408020.1 Phenylpropanoid PAL medium pass
Pcabscaffold_220_1-13634480441510.1 Phenylpropanoid PAL low borderline
Pcabscaffold_22450450640.1 Phenylpropanoid PAL low borderline
Pcabscaffold_2310467990.1 Phenylpropanoid PAL medium pass
Pcabscaffold_24730495840.1 Phenylpropanoid PAL high pass
Pcabscaffold_3150605880.1 Phenylpropanoid PAL high pass
Pcabscaffold_3150605890.1 Phenylpropanoid PAL high pass
Pcabscaffold_32040615780.1 Phenylpropanoid PAL high pass
Pcabscaffold_33820637880.1 Phenylpropanoid PAL low borderline
Pcabscaffold_35220654650.1 Phenylpropanoid PAL medium pass
Pcabscaffold_35220654660.1 Phenylpropanoid PAL low borderline
Pcabscaffold_36290666020.1 Phenylpropanoid PAL medium pass
Pcabscaffold_36290666030.1 Phenylpropanoid PAL medium pass
Pcabscaffold_590874440.1 Phenylpropanoid PAL medium pass
Pcabscaffold_60_1-13294730887380.1 Phenylpropanoid PAL high pass
Pcabscaffold_60_1-13294730887390.1 Phenylpropanoid PAL medium pass
Pcabscaffold_6620925000.1 Phenylpropanoid PAL low borderline
Pcabscaffold_7400966830.1 Phenylpropanoid PAL high pass
Pcabscaffold_7400966840.1 Phenylpropanoid PAL high pass
Pcabscaffold_7400966850.1 Phenylpropanoid PAL medium pass
Pcabscaffold_831022610.1 Phenylpropanoid PAL medium pass
Pcabscaffold_831022620.1 Phenylpropanoid PAL high pass
Pcabscaffold_831024430.1 Phenylpropanoid PAL medium pass
Pcabscaffold_10210021630.1 Rosmarinic Acid PAL medium pass
Pcabscaffold_10310025840.1 Rosmarinic Acid PAL low borderline
Pcabscaffold_10620037720.1 Rosmarinic Acid PAL high pass
Pcabscaffold_112_419008-19102860063890.1 Rosmarinic Acid PAL low borderline
Pcabscaffold_1200094110.1 Rosmarinic Acid PAL medium pass
Pcabscaffold_1200094120.1 Rosmarinic Acid PAL high pass
Pcabscaffold_1200094130.1 Rosmarinic Acid PAL medium pass
Pcabscaffold_1390171190.1 Rosmarinic Acid PAL medium pass
Pcabscaffold_1400177810.1 Rosmarinic Acid PAL high pass
Pcabscaffold_1620266250.1 Rosmarinic Acid PAL high pass
Pcabscaffold_1620266260.1 Rosmarinic Acid PAL medium pass
Pcabscaffold_1620266270.1 Rosmarinic Acid PAL high pass