PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
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Gene Pathway Family Confidence Status
Pcabscaffold_10040015330.1 Alkaloid PMT low borderline
Pcabscaffold_10310025700.1 Alkaloid PMT low borderline
Pcabscaffold_11640078510.1 Alkaloid PMT low borderline
Pcabscaffold_11640078520.1 Alkaloid PMT low borderline
Pcabscaffold_13080141070.1 Alkaloid PMT low borderline
Pcabscaffold_1390170860.1 Alkaloid PMT medium borderline
Pcabscaffold_1430189740.1 Alkaloid PMT low borderline
Pcabscaffold_1430189760.1 Alkaloid PMT low borderline
Pcabscaffold_1430189770.1 Alkaloid PMT low borderline
Pcabscaffold_1480211000.1 Alkaloid PMT low borderline
Pcabscaffold_14820212840.1 Alkaloid PMT low borderline
Pcabscaffold_150217700.1 Alkaloid PMT low borderline
Pcabscaffold_1580248290.1 Alkaloid PMT low borderline
Pcabscaffold_15890253570.1 Alkaloid PMT medium pass
Pcabscaffold_1910351940.1 Alkaloid PMT low borderline
Pcabscaffold_19390358710.1 Alkaloid PMT low borderline
Pcabscaffold_1_1017389-68718490376090.1 Alkaloid PMT low borderline
Pcabscaffold_1_1017389-68718490376110.1 Alkaloid PMT low borderline
Pcabscaffold_2060408350.1 Alkaloid PMT medium borderline
Pcabscaffold_21250423570.1 Alkaloid PMT low borderline
Pcabscaffold_21250423590.1 Alkaloid PMT low borderline
Pcabscaffold_21250423600.1 Alkaloid PMT low borderline
Pcabscaffold_22760456610.1 Alkaloid PMT medium borderline
Pcabscaffold_2300465550.1 Alkaloid PMT low borderline
Pcabscaffold_252_1-5600220503120.1 Alkaloid PMT low borderline
Pcabscaffold_252_564642-10537760503250.1 Alkaloid PMT low borderline
Pcabscaffold_252_564642-10537760503350.1 Alkaloid PMT low borderline
Pcabscaffold_252_564642-10537760503480.1 Alkaloid PMT low borderline
Pcabscaffold_2570510800.1 Alkaloid PMT low borderline
Pcabscaffold_2710541890.1 Alkaloid PMT low borderline
Pcabscaffold_27380545550.1 Alkaloid PMT low borderline
Pcabscaffold_2740546720.1 Alkaloid PMT medium pass
Pcabscaffold_27670551210.1 Alkaloid PMT medium borderline
Pcabscaffold_2827_1-1089350557530.1 Alkaloid PMT low borderline
Pcabscaffold_2860562120.1 Alkaloid PMT low borderline
Pcabscaffold_28_1-21021360568930.1 Alkaloid PMT low borderline
Pcabscaffold_30050588650.1 Alkaloid PMT low borderline
Pcabscaffold_30410593250.1 Alkaloid PMT medium pass
Pcabscaffold_30410593260.1 Alkaloid PMT medium pass
Pcabscaffold_30680594970.1 Alkaloid PMT medium pass
Pcabscaffold_3120603190.1 Alkaloid PMT low borderline
Pcabscaffold_3270622690.1 Alkaloid PMT low borderline
Pcabscaffold_37_284008-34862800682380.1 Alkaloid PMT low borderline
Pcabscaffold_3920696130.1 Alkaloid PMT medium pass
Pcabscaffold_4040718030.1 Alkaloid PMT medium pass
Pcabscaffold_4080722460.1 Alkaloid PMT low borderline
Pcabscaffold_4210734890.1 Alkaloid PMT medium pass
Pcabscaffold_4220735290.1 Alkaloid PMT low borderline
Pcabscaffold_4220735300.1 Alkaloid PMT low borderline
Pcabscaffold_4250736710.1 Alkaloid PMT medium borderline