PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
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Gene Pathway Family Confidence Status
Pcabscaffold_4300742940.1 Alkaloid PMT medium pass
Pcabscaffold_4300742950.1 Alkaloid PMT low borderline
Pcabscaffold_4300742960.1 Alkaloid PMT medium pass
Pcabscaffold_4300742970.1 Alkaloid PMT low borderline
Pcabscaffold_4420751140.1 Alkaloid PMT medium pass
Pcabscaffold_4420751150.1 Alkaloid PMT low borderline
Pcabscaffold_470774620.1 Alkaloid PMT medium pass
Pcabscaffold_480783880.1 Alkaloid PMT low borderline
Pcabscaffold_49050792920.1 Alkaloid PMT medium pass
Pcabscaffold_4940796120.1 Alkaloid PMT medium borderline
Pcabscaffold_500811770.1 Alkaloid PMT medium pass
Pcabscaffold_500811780.1 Alkaloid PMT low borderline
Pcabscaffold_510819760.1 Alkaloid PMT medium pass
Pcabscaffold_5180824130.1 Alkaloid PMT low borderline
Pcabscaffold_577_1-3513130867070.1 Alkaloid PMT low borderline
Pcabscaffold_577_1-3513130867080.1 Alkaloid PMT low borderline
Pcabscaffold_620898170.1 Alkaloid PMT medium pass
Pcabscaffold_690939250.1 Alkaloid PMT low borderline
Pcabscaffold_690939280.1 Alkaloid PMT low borderline
Pcabscaffold_690939300.1 Alkaloid PMT low borderline
Pcabscaffold_690939330.1 Alkaloid PMT low borderline
Pcabscaffold_690939340.1 Alkaloid PMT low borderline
Pcabscaffold_7630978310.1 Alkaloid PMT low borderline
Pcabscaffold_7780987430.1 Alkaloid PMT low borderline
Pcabscaffold_790993940.1 Alkaloid PMT medium pass
Pcabscaffold_8391028450.1 Alkaloid PMT low borderline
Pcabscaffold_8661042350.1 Alkaloid PMT low borderline
Pcabscaffold_8661042360.1 Alkaloid PMT low borderline
Pcabscaffold_871045450.1 Alkaloid PMT medium pass
Pcabscaffold_8841050990.1 Alkaloid PMT low borderline
Pcabscaffold_891055240.1 Alkaloid PMT low borderline
Pcabscaffold_891055250.1 Alkaloid PMT low borderline
Pcabscaffold_921069300.1 Alkaloid PMT medium borderline
Pcabscaffold_921071580.1 Alkaloid PMT medium pass
Pcabscaffold_9251074780.1 Alkaloid PMT low borderline
Pcabscaffold_9391081070.1 Alkaloid PMT medium pass
Pcabscaffold_9521088050.1 Alkaloid PMT low borderline
Pcabscaffold_9521088060.1 Alkaloid PMT low borderline