PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
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Gene Pathway Family Confidence Status
Pcabscaffold_20381100.1 Alkaloid PYKS low borderline
Pcabscaffold_20382230.1 Alkaloid PYKS low borderline
Pcabscaffold_20382240.1 Alkaloid PYKS low borderline
Pcabscaffold_20387600.1 Alkaloid PYKS low borderline
Pcabscaffold_20388330.1 Alkaloid PYKS high pass
Pcabscaffold_2100417980.1 Alkaloid PYKS low borderline
Pcabscaffold_2100418000.1 Alkaloid PYKS medium pass
Pcabscaffold_21380424990.1 Alkaloid PYKS low borderline
Pcabscaffold_2160430140.1 Alkaloid PYKS low borderline
Pcabscaffold_2160430400.1 Alkaloid PYKS low borderline
Pcabscaffold_2160430420.1 Alkaloid PYKS low borderline
Pcabscaffold_220439880.1 Alkaloid PYKS low borderline
Pcabscaffold_230464330.1 Alkaloid PYKS low borderline
Pcabscaffold_230464620.1 Alkaloid PYKS low borderline
Pcabscaffold_2360475540.1 Alkaloid PYKS low borderline
Pcabscaffold_2380479380.1 Alkaloid PYKS low borderline
Pcabscaffold_2460494080.1 Alkaloid PYKS low borderline
Pcabscaffold_2480496430.1 Alkaloid PYKS low borderline
Pcabscaffold_2490497900.1 Alkaloid PYKS low borderline
Pcabscaffold_2560508930.1 Alkaloid PYKS low borderline
Pcabscaffold_27600550680.1 Alkaloid PYKS low borderline
Pcabscaffold_2820556560.1 Alkaloid PYKS high pass
Pcabscaffold_2840560130.1 Alkaloid PYKS high pass
Pcabscaffold_28470561110.1 Alkaloid PYKS high pass
Pcabscaffold_28_1-21021360566970.1 Alkaloid PYKS low borderline
Pcabscaffold_30890597130.1 Alkaloid PYKS low borderline
Pcabscaffold_3090597290.1 Alkaloid PYKS low borderline
Pcabscaffold_3160606450.1 Alkaloid PYKS low borderline
Pcabscaffold_32030615700.1 Alkaloid PYKS low borderline
Pcabscaffold_32460619640.1 Alkaloid PYKS low borderline
Pcabscaffold_33320631060.1 Alkaloid PYKS low borderline
Pcabscaffold_334710633620.1 Alkaloid PYKS low borderline
Pcabscaffold_33910638740.1 Alkaloid PYKS high pass
Pcabscaffold_33910638750.1 Alkaloid PYKS high pass
Pcabscaffold_33910638760.1 Alkaloid PYKS medium pass
Pcabscaffold_33910638780.1 Alkaloid PYKS high pass
Pcabscaffold_33910638800.1 Alkaloid PYKS high pass
Pcabscaffold_350650750.1 Alkaloid PYKS low borderline
Pcabscaffold_3720675720.1 Alkaloid PYKS low borderline
Pcabscaffold_37_284008-34862800681030.1 Alkaloid PYKS medium pass
Pcabscaffold_37_284008-34862800681040.1 Alkaloid PYKS medium pass
Pcabscaffold_382380687980.1 Alkaloid PYKS low borderline
Pcabscaffold_383_1-10745670688760.1 Alkaloid PYKS low borderline
Pcabscaffold_3840690390.1 Alkaloid PYKS medium pass
Pcabscaffold_3970700500.1 Alkaloid PYKS high pass
Pcabscaffold_3970701220.1 Alkaloid PYKS low borderline
Pcabscaffold_3_1-26455000708400.1 Alkaloid PYKS low borderline
Pcabscaffold_41490729700.1 Alkaloid PYKS low borderline
Pcabscaffold_4380747300.1 Alkaloid PYKS low borderline
Pcabscaffold_4490755250.1 Alkaloid PYKS medium pass