PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
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Gene Pathway Family Confidence Status
Pcabscaffold_4790782240.1 Alkaloid PYKS medium pass
Pcabscaffold_4_900905-60197250803270.1 Alkaloid PYKS low borderline
Pcabscaffold_4_900905-60197250804510.1 Alkaloid PYKS low borderline
Pcabscaffold_4_900905-60197250804880.1 Alkaloid PYKS low borderline
Pcabscaffold_4_900905-60197250805430.1 Alkaloid PYKS low borderline
Pcabscaffold_5020813640.1 Alkaloid PYKS low borderline
Pcabscaffold_5050814490.1 Alkaloid PYKS high pass
Pcabscaffold_5050814500.1 Alkaloid PYKS high pass
Pcabscaffold_5050814510.1 Alkaloid PYKS high pass
Pcabscaffold_5050814520.1 Alkaloid PYKS medium pass
Pcabscaffold_5050814530.1 Alkaloid PYKS high pass
Pcabscaffold_5050814540.1 Alkaloid PYKS high pass
Pcabscaffold_5050814550.1 Alkaloid PYKS medium pass
Pcabscaffold_5050814560.1 Alkaloid PYKS high pass
Pcabscaffold_5070816490.1 Alkaloid PYKS low borderline
Pcabscaffold_5090816890.1 Alkaloid PYKS low borderline
Pcabscaffold_5090816910.1 Alkaloid PYKS low borderline
Pcabscaffold_5110821180.1 Alkaloid PYKS high pass
Pcabscaffold_530831300.1 Alkaloid PYKS high pass
Pcabscaffold_5340836280.1 Alkaloid PYKS high pass
Pcabscaffold_5340836290.1 Alkaloid PYKS medium pass
Pcabscaffold_5340836300.1 Alkaloid PYKS medium pass
Pcabscaffold_5550851910.1 Alkaloid PYKS low borderline
Pcabscaffold_5790868000.1 Alkaloid PYKS high pass
Pcabscaffold_5910876070.1 Alkaloid PYKS low borderline
Pcabscaffold_6020883900.1 Alkaloid PYKS low borderline
Pcabscaffold_610888730.1 Alkaloid PYKS low borderline
Pcabscaffold_610892020.1 Alkaloid PYKS low borderline
Pcabscaffold_610892030.1 Alkaloid PYKS low borderline
Pcabscaffold_620896830.1 Alkaloid PYKS low borderline
Pcabscaffold_6400911170.1 Alkaloid PYKS low borderline
Pcabscaffold_670928200.1 Alkaloid PYKS low borderline
Pcabscaffold_690937320.1 Alkaloid PYKS low borderline
Pcabscaffold_6980942810.1 Alkaloid PYKS low borderline
Pcabscaffold_7000944620.1 Alkaloid PYKS low borderline
Pcabscaffold_7000944630.1 Alkaloid PYKS low borderline
Pcabscaffold_710950560.1 Alkaloid PYKS low borderline
Pcabscaffold_7250957110.1 Alkaloid PYKS low borderline
Pcabscaffold_7560976150.1 Alkaloid PYKS low borderline
Pcabscaffold_770983750.1 Alkaloid PYKS low borderline
Pcabscaffold_770983760.1 Alkaloid PYKS low borderline
Pcabscaffold_790993660.1 Alkaloid PYKS medium pass
Pcabscaffold_7950997800.1 Alkaloid PYKS low borderline
Pcabscaffold_821018600.1 Alkaloid PYKS low borderline
Pcabscaffold_8391028400.1 Alkaloid PYKS high pass
Pcabscaffold_8411030290.1 Alkaloid PYKS low borderline
Pcabscaffold_8601040960.1 Alkaloid PYKS low borderline
Pcabscaffold_861040190.1 Alkaloid PYKS high pass
Pcabscaffold_861040200.1 Alkaloid PYKS high pass
Pcabscaffold_861040210.1 Alkaloid PYKS low borderline