PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SLS
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Gene Pathway Family Confidence Status
Pcabscaffold_40_1-6370950723820.1 Alkaloid SLS medium borderline
Pcabscaffold_40_644123-29686580723950.1 Alkaloid SLS medium borderline
Pcabscaffold_40_644123-29686580723960.1 Alkaloid SLS medium borderline
Pcabscaffold_4710777590.1 Alkaloid SLS medium borderline
Pcabscaffold_4800786090.1 Alkaloid SLS medium borderline
Pcabscaffold_500810100.1 Alkaloid SLS medium borderline
Pcabscaffold_5090816960.1 Alkaloid SLS medium borderline
Pcabscaffold_520825480.1 Alkaloid SLS medium borderline
Pcabscaffold_5210826240.1 Alkaloid SLS medium borderline
Pcabscaffold_5210826350.1 Alkaloid SLS medium borderline
Pcabscaffold_530830910.1 Alkaloid SLS medium borderline
Pcabscaffold_530832320.1 Alkaloid SLS medium borderline
Pcabscaffold_540840910.1 Alkaloid SLS medium borderline
Pcabscaffold_6000883390.1 Alkaloid SLS medium borderline
Pcabscaffold_610890540.1 Alkaloid SLS medium borderline
Pcabscaffold_610890550.1 Alkaloid SLS medium borderline
Pcabscaffold_630904430.1 Alkaloid SLS medium borderline
Pcabscaffold_6350907460.1 Alkaloid SLS medium borderline
Pcabscaffold_6520918000.1 Alkaloid SLS medium borderline
Pcabscaffold_6610924750.1 Alkaloid SLS low borderline
Pcabscaffold_6610924780.1 Alkaloid SLS medium borderline
Pcabscaffold_7520974720.1 Alkaloid SLS medium borderline
Pcabscaffold_770983690.1 Alkaloid SLS medium borderline
Pcabscaffold_7820990760.1 Alkaloid SLS medium borderline
Pcabscaffold_8321025220.1 Alkaloid SLS medium borderline
Pcabscaffold_8361027030.1 Alkaloid SLS low borderline
Pcabscaffold_9301079170.1 Alkaloid SLS medium borderline
Pcabscaffold_931076190.1 Alkaloid SLS medium borderline
Pcabscaffold_931076200.1 Alkaloid SLS medium borderline
Pcabscaffold_9761099060.1 Alkaloid SLS medium pass
Pcabscaffold_9761099080.1 Alkaloid SLS medium borderline
Pcabscaffold_9761099160.1 Alkaloid SLS medium borderline