PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
Pcabscaffold_2240448550.1 Alkaloid T16H medium borderline
Pcabscaffold_22570452400.1 Alkaloid T16H medium borderline
Pcabscaffold_2290458170.1 Alkaloid T16H medium borderline
Pcabscaffold_2290458630.1 Alkaloid T16H low borderline
Pcabscaffold_230464440.1 Alkaloid T16H medium borderline
Pcabscaffold_230464480.1 Alkaloid T16H medium borderline
Pcabscaffold_230464500.1 Alkaloid T16H medium borderline
Pcabscaffold_2310467760.1 Alkaloid T16H medium borderline
Pcabscaffold_2330471070.1 Alkaloid T16H medium borderline
Pcabscaffold_2330471150.1 Alkaloid T16H medium borderline
Pcabscaffold_240484730.1 Alkaloid T16H medium borderline
Pcabscaffold_240484740.1 Alkaloid T16H medium borderline
Pcabscaffold_240485680.1 Alkaloid T16H low borderline
Pcabscaffold_2440491440.1 Alkaloid T16H medium borderline
Pcabscaffold_2460494140.1 Alkaloid T16H medium borderline
Pcabscaffold_24860496920.1 Alkaloid T16H medium borderline
Pcabscaffold_25140501620.1 Alkaloid T16H medium borderline
Pcabscaffold_25140501630.1 Alkaloid T16H low borderline
Pcabscaffold_25140501650.1 Alkaloid T16H medium borderline
Pcabscaffold_2530503710.1 Alkaloid T16H medium borderline
Pcabscaffold_2600519010.1 Alkaloid T16H low borderline
Pcabscaffold_2650527990.1 Alkaloid T16H medium borderline
Pcabscaffold_2650528010.1 Alkaloid T16H medium borderline
Pcabscaffold_26720531690.1 Alkaloid T16H medium borderline
Pcabscaffold_26930537180.1 Alkaloid T16H medium borderline
Pcabscaffold_2730544650.1 Alkaloid T16H low borderline
Pcabscaffold_2730544790.1 Alkaloid T16H medium borderline
Pcabscaffold_2730544910.1 Alkaloid T16H medium borderline
Pcabscaffold_2870563330.1 Alkaloid T16H medium borderline
Pcabscaffold_2900571480.1 Alkaloid T16H medium borderline
Pcabscaffold_3020590910.1 Alkaloid T16H medium borderline
Pcabscaffold_3020590930.1 Alkaloid T16H medium borderline
Pcabscaffold_3020590940.1 Alkaloid T16H medium borderline
Pcabscaffold_3040593150.1 Alkaloid T16H medium borderline
Pcabscaffold_308010596680.1 Alkaloid T16H medium borderline
Pcabscaffold_3140604720.1 Alkaloid T16H medium borderline
Pcabscaffold_3190611480.1 Alkaloid T16H medium borderline
Pcabscaffold_3240618980.1 Alkaloid T16H medium borderline
Pcabscaffold_32430619470.1 Alkaloid T16H low borderline
Pcabscaffold_3430643720.1 Alkaloid T16H medium borderline
Pcabscaffold_35210654600.1 Alkaloid T16H medium borderline
Pcabscaffold_3570657960.1 Alkaloid T16H medium borderline
Pcabscaffold_3570658140.1 Alkaloid T16H medium borderline
Pcabscaffold_3570658160.1 Alkaloid T16H medium pass
Pcabscaffold_365800668620.1 Alkaloid T16H medium borderline
Pcabscaffold_380685460.1 Alkaloid T16H medium borderline
Pcabscaffold_38320688090.1 Alkaloid T16H medium borderline
Pcabscaffold_383_1-10745670689180.1 Alkaloid T16H low borderline
Pcabscaffold_3860692410.1 Alkaloid T16H medium borderline
Pcabscaffold_3980701770.1 Alkaloid T16H low borderline