PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
Pcabscaffold_3990702540.1 Alkaloid T16H medium borderline
Pcabscaffold_39_3309495-57433670706250.1 Alkaloid T16H medium borderline
Pcabscaffold_4040717830.1 Alkaloid T16H medium borderline
Pcabscaffold_4040717840.1 Alkaloid T16H medium borderline
Pcabscaffold_40520719340.1 Alkaloid T16H low borderline
Pcabscaffold_4070721610.1 Alkaloid T16H medium borderline
Pcabscaffold_4110727650.1 Alkaloid T16H low borderline
Pcabscaffold_42730738480.1 Alkaloid T16H low borderline
Pcabscaffold_4430752190.1 Alkaloid T16H medium borderline
Pcabscaffold_4500757990.1 Alkaloid T16H medium borderline
Pcabscaffold_4660767450.1 Alkaloid T16H low borderline
Pcabscaffold_4810787470.1 Alkaloid T16H low borderline
Pcabscaffold_4850789840.1 Alkaloid T16H medium borderline
Pcabscaffold_4850789850.1 Alkaloid T16H medium borderline
Pcabscaffold_4_900905-60197250801290.1 Alkaloid T16H low borderline
Pcabscaffold_4_900905-60197250804630.1 Alkaloid T16H medium borderline
Pcabscaffold_500809850.1 Alkaloid T16H medium borderline
Pcabscaffold_500811050.1 Alkaloid T16H medium borderline
Pcabscaffold_500811980.1 Alkaloid T16H medium borderline
Pcabscaffold_5220826520.1 Alkaloid T16H medium borderline
Pcabscaffold_5340836310.1 Alkaloid T16H low borderline
Pcabscaffold_5380838310.1 Alkaloid T16H medium borderline
Pcabscaffold_5480846110.1 Alkaloid T16H medium borderline
Pcabscaffold_5520849860.1 Alkaloid T16H medium borderline
Pcabscaffold_56_1-23225690857860.1 Alkaloid T16H low borderline
Pcabscaffold_570860820.1 Alkaloid T16H medium borderline
Pcabscaffold_57310864900.1 Alkaloid T16H medium borderline
Pcabscaffold_5750866280.1 Alkaloid T16H medium pass
Pcabscaffold_5750866450.1 Alkaloid T16H medium borderline
Pcabscaffold_610891780.1 Alkaloid T16H medium borderline
Pcabscaffold_620897730.1 Alkaloid T16H low borderline
Pcabscaffold_6230899750.1 Alkaloid T16H medium pass
Pcabscaffold_6230899900.1 Alkaloid T16H medium pass
Pcabscaffold_644_1-5235120912970.1 Alkaloid T16H low borderline
Pcabscaffold_6470914790.1 Alkaloid T16H medium borderline
Pcabscaffold_6500916590.1 Alkaloid T16H medium pass
Pcabscaffold_6500916620.1 Alkaloid T16H medium borderline
Pcabscaffold_6530918130.1 Alkaloid T16H medium borderline
Pcabscaffold_66550925970.1 Alkaloid T16H medium borderline
Pcabscaffold_6670926410.1 Alkaloid T16H medium pass
Pcabscaffold_6740930570.1 Alkaloid T16H medium borderline
Pcabscaffold_6820933970.1 Alkaloid T16H medium borderline
Pcabscaffold_6890936900.1 Alkaloid T16H medium borderline
Pcabscaffold_7350965350.1 Alkaloid T16H low borderline
Pcabscaffold_74_258846-35974070972320.1 Alkaloid T16H low borderline
Pcabscaffold_7780987620.1 Alkaloid T16H medium borderline
Pcabscaffold_7780987630.1 Alkaloid T16H medium borderline
Pcabscaffold_780988310.1 Alkaloid T16H low borderline
Pcabscaffold_7830991170.1 Alkaloid T16H medium borderline
Pcabscaffold_7890993060.1 Alkaloid T16H medium borderline