PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status Best Target
Pcabscaffold_811013820.1 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pcabscaffold_8121015160.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Pcabscaffold_8131015500.1 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pcabscaffold_831023250.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Pcabscaffold_8411029950.1 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pcabscaffold_8411029980.1 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pcabscaffold_871043790.1 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pcabscaffold_901061100.1 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pcabscaffold_901061570.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Pcabscaffold_9161068300.1 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pcabscaffold_9211073660.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Pcabscaffold_9221074230.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Pcabscaffold_931077470.1 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pcabscaffold_941082070.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Pcabscaffold_951086510.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Pcabscaffold_961090590.1 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pcabscaffold_9841101090.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Pcabscaffold_9841101100.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Pcabscaffold_9911103370.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO