PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Pcabscaffold_0_1653057-107288310001790.1 Alkaloid T3O low borderline
Pcabscaffold_0_1653057-107288310001800.1 Alkaloid T3O medium pass
Pcabscaffold_0_1653057-107288310001810.1 Alkaloid T3O medium pass
Pcabscaffold_0_1653057-107288310001830.1 Alkaloid T3O medium pass
Pcabscaffold_0_1653057-107288310001890.1 Alkaloid T3O medium pass
Pcabscaffold_0_1653057-107288310005330.1 Alkaloid T3O medium borderline
Pcabscaffold_0_1653057-107288310005380.1 Alkaloid T3O medium borderline
Pcabscaffold_10060015890.1 Alkaloid T3O medium pass
Pcabscaffold_10060015900.1 Alkaloid T3O medium pass
Pcabscaffold_10060015910.1 Alkaloid T3O medium pass
Pcabscaffold_10100017160.1 Alkaloid T3O medium borderline
Pcabscaffold_10170019180.1 Alkaloid T3O medium borderline
Pcabscaffold_10220021660.1 Alkaloid T3O medium borderline
Pcabscaffold_10230021990.1 Alkaloid T3O medium borderline
Pcabscaffold_10230022000.1 Alkaloid T3O medium borderline
Pcabscaffold_10230022010.1 Alkaloid T3O medium borderline
Pcabscaffold_10230022040.1 Alkaloid T3O medium borderline
Pcabscaffold_10350026710.1 Alkaloid T3O low borderline
Pcabscaffold_10350026720.1 Alkaloid T3O medium pass
Pcabscaffold_10350026830.1 Alkaloid T3O medium pass
Pcabscaffold_10450029490.1 Alkaloid T3O medium borderline
Pcabscaffold_10460029730.1 Alkaloid T3O medium pass
Pcabscaffold_10460029740.1 Alkaloid T3O medium pass
Pcabscaffold_10460029750.1 Alkaloid T3O medium pass
Pcabscaffold_10480030260.1 Alkaloid T3O low borderline
Pcabscaffold_104_1-3224010030820.1 Alkaloid T3O medium borderline
Pcabscaffold_10570033600.1 Alkaloid T3O medium borderline
Pcabscaffold_10570033610.1 Alkaloid T3O medium borderline
Pcabscaffold_10570033630.1 Alkaloid T3O medium borderline
Pcabscaffold_10570033660.1 Alkaloid T3O medium borderline
Pcabscaffold_105_81081-20652500035190.1 Alkaloid T3O low borderline
Pcabscaffold_105_81081-20652500035280.1 Alkaloid T3O medium borderline
Pcabscaffold_105_81081-20652500035720.1 Alkaloid T3O medium borderline
Pcabscaffold_105_81081-20652500035730.1 Alkaloid T3O medium borderline
Pcabscaffold_105_81081-20652500035760.1 Alkaloid T3O medium borderline
Pcabscaffold_105_81081-20652500035770.1 Alkaloid T3O medium borderline
Pcabscaffold_105_81081-20652500035780.1 Alkaloid T3O medium borderline
Pcabscaffold_105_81081-20652500035790.1 Alkaloid T3O medium borderline
Pcabscaffold_105_81081-20652500035800.1 Alkaloid T3O medium borderline
Pcabscaffold_105_81081-20652500035860.1 Alkaloid T3O medium borderline
Pcabscaffold_105_81081-20652500035870.1 Alkaloid T3O medium borderline
Pcabscaffold_105_81081-20652500035920.1 Alkaloid T3O medium borderline
Pcabscaffold_105_81081-20652500035940.1 Alkaloid T3O medium borderline
Pcabscaffold_10710042890.1 Alkaloid T3O medium borderline
Pcabscaffold_10750044240.1 Alkaloid T3O medium borderline
Pcabscaffold_10750044250.1 Alkaloid T3O medium borderline
Pcabscaffold_10810046530.1 Alkaloid T3O low borderline
Pcabscaffold_10930049310.1 Alkaloid T3O medium borderline
Pcabscaffold_10930049320.1 Alkaloid T3O medium borderline
Pcabscaffold_10930049330.1 Alkaloid T3O medium borderline