PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Pcabscaffold_10950049770.1 Alkaloid T3O medium borderline
Pcabscaffold_10950049780.1 Alkaloid T3O medium borderline
Pcabscaffold_110_71771-19721700055760.1 Alkaloid T3O medium borderline
Pcabscaffold_1110057290.1 Alkaloid T3O medium borderline
Pcabscaffold_11180060360.1 Alkaloid T3O medium borderline
Pcabscaffold_11190060800.1 Alkaloid T3O medium borderline
Pcabscaffold_11270062970.1 Alkaloid T3O medium borderline
Pcabscaffold_112_419008-19102860064310.1 Alkaloid T3O medium pass
Pcabscaffold_112_419008-19102860064450.1 Alkaloid T3O low borderline
Pcabscaffold_112_419008-19102860064460.1 Alkaloid T3O low borderline
Pcabscaffold_112_419008-19102860064470.1 Alkaloid T3O low borderline
Pcabscaffold_112_419008-19102860064490.1 Alkaloid T3O low borderline
Pcabscaffold_1130065920.1 Alkaloid T3O medium borderline
Pcabscaffold_11330067140.1 Alkaloid T3O low borderline
Pcabscaffold_11380068290.1 Alkaloid T3O medium borderline
Pcabscaffold_11580075880.1 Alkaloid T3O medium pass
Pcabscaffold_11700081030.1 Alkaloid T3O medium borderline
Pcabscaffold_11700081210.1 Alkaloid T3O medium pass
Pcabscaffold_11810084130.1 Alkaloid T3O low borderline
Pcabscaffold_12300103610.1 Alkaloid T3O medium borderline
Pcabscaffold_12300103650.1 Alkaloid T3O medium borderline
Pcabscaffold_12500113030.1 Alkaloid T3O medium borderline
Pcabscaffold_1250112260.1 Alkaloid T3O medium borderline
Pcabscaffold_1250112290.1 Alkaloid T3O medium borderline
Pcabscaffold_12580115050.1 Alkaloid T3O low borderline
Pcabscaffold_12830125360.1 Alkaloid T3O medium pass
Pcabscaffold_12860125820.1 Alkaloid T3O medium borderline
Pcabscaffold_130136140.1 Alkaloid T3O medium pass
Pcabscaffold_131_1-11490260145060.1 Alkaloid T3O medium borderline
Pcabscaffold_132220146370.1 Alkaloid T3O medium borderline
Pcabscaffold_13230146480.1 Alkaloid T3O medium pass
Pcabscaffold_13230146730.1 Alkaloid T3O medium pass
Pcabscaffold_13270147120.1 Alkaloid T3O medium borderline
Pcabscaffold_13500156890.1 Alkaloid T3O medium borderline
Pcabscaffold_1360161590.1 Alkaloid T3O medium pass
Pcabscaffold_13700165270.1 Alkaloid T3O medium pass
Pcabscaffold_1370164770.1 Alkaloid T3O medium borderline
Pcabscaffold_14100182810.1 Alkaloid T3O low borderline
Pcabscaffold_1410182620.1 Alkaloid T3O medium borderline
Pcabscaffold_14160184560.1 Alkaloid T3O medium borderline
Pcabscaffold_14160184600.1 Alkaloid T3O medium borderline
Pcabscaffold_1420185500.1 Alkaloid T3O medium pass
Pcabscaffold_1440193090.1 Alkaloid T3O low borderline
Pcabscaffold_1480210460.1 Alkaloid T3O medium borderline
Pcabscaffold_1480210510.1 Alkaloid T3O medium borderline
Pcabscaffold_1480210540.1 Alkaloid T3O medium borderline
Pcabscaffold_1480210570.1 Alkaloid T3O medium borderline
Pcabscaffold_1480211330.1 Alkaloid T3O medium borderline
Pcabscaffold_1480211380.1 Alkaloid T3O medium borderline
Pcabscaffold_1480211400.1 Alkaloid T3O medium borderline