PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Pcabscaffold_1480211770.1 Alkaloid T3O medium borderline
Pcabscaffold_1480211780.1 Alkaloid T3O medium borderline
Pcabscaffold_1480211850.1 Alkaloid T3O low borderline
Pcabscaffold_1500220930.1 Alkaloid T3O low borderline
Pcabscaffold_1510225450.1 Alkaloid T3O medium pass
Pcabscaffold_1510226320.1 Alkaloid T3O medium borderline
Pcabscaffold_1510226330.1 Alkaloid T3O medium borderline
Pcabscaffold_15270231560.1 Alkaloid T3O medium borderline
Pcabscaffold_15510240190.1 Alkaloid T3O medium borderline
Pcabscaffold_15570241380.1 Alkaloid T3O medium pass
Pcabscaffold_15570241390.1 Alkaloid T3O medium pass
Pcabscaffold_15580241560.1 Alkaloid T3O medium borderline
Pcabscaffold_15580241590.1 Alkaloid T3O medium borderline
Pcabscaffold_15580241700.1 Alkaloid T3O medium borderline
Pcabscaffold_1560242820.1 Alkaloid T3O medium borderline
Pcabscaffold_1560242840.1 Alkaloid T3O medium borderline
Pcabscaffold_1560242930.1 Alkaloid T3O medium borderline
Pcabscaffold_1560242960.1 Alkaloid T3O medium borderline
Pcabscaffold_1570244730.1 Alkaloid T3O low borderline
Pcabscaffold_1570244750.1 Alkaloid T3O low borderline
Pcabscaffold_1570244760.1 Alkaloid T3O low borderline
Pcabscaffold_161_179220-17084620264290.1 Alkaloid T3O medium borderline
Pcabscaffold_161_179220-17084620265550.1 Alkaloid T3O medium borderline
Pcabscaffold_161_179220-17084620265580.1 Alkaloid T3O medium borderline
Pcabscaffold_161_179220-17084620265600.1 Alkaloid T3O medium borderline
Pcabscaffold_161_179220-17084620265610.1 Alkaloid T3O medium borderline
Pcabscaffold_1620266100.1 Alkaloid T3O low borderline
Pcabscaffold_1620266400.1 Alkaloid T3O medium borderline
Pcabscaffold_16260268130.1 Alkaloid T3O medium borderline
Pcabscaffold_16360270570.1 Alkaloid T3O low borderline
Pcabscaffold_16510275220.1 Alkaloid T3O medium borderline
Pcabscaffold_1660276610.1 Alkaloid T3O medium borderline
Pcabscaffold_1680283680.1 Alkaloid T3O medium pass
Pcabscaffold_16880285400.1 Alkaloid T3O medium borderline
Pcabscaffold_169_1-5014340287990.1 Alkaloid T3O medium borderline
Pcabscaffold_169_503578-11205330288330.1 Alkaloid T3O medium borderline
Pcabscaffold_17050290390.1 Alkaloid T3O low borderline
Pcabscaffold_17100292420.1 Alkaloid T3O medium pass
Pcabscaffold_1710292140.1 Alkaloid T3O medium borderline
Pcabscaffold_1710292190.1 Alkaloid T3O medium borderline
Pcabscaffold_1710292200.1 Alkaloid T3O medium borderline
Pcabscaffold_17190293470.1 Alkaloid T3O medium pass
Pcabscaffold_17240296430.1 Alkaloid T3O medium pass
Pcabscaffold_17460301620.1 Alkaloid T3O low borderline
Pcabscaffold_17650305070.1 Alkaloid T3O medium borderline
Pcabscaffold_17660305250.1 Alkaloid T3O medium borderline
Pcabscaffold_17660305380.1 Alkaloid T3O medium borderline
Pcabscaffold_17660305400.1 Alkaloid T3O medium borderline
Pcabscaffold_1810323740.1 Alkaloid T3O medium borderline
Pcabscaffold_1860336360.1 Alkaloid T3O medium borderline