PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Pcabscaffold_0_1653057-107288310001610.1 Steroid BR6OX1/CYP85A1 medium borderline
Pcabscaffold_10100017130.1 Steroid BR6OX1/CYP85A1 medium borderline
Pcabscaffold_10460029750.1 Steroid BR6OX1/CYP85A1 medium borderline
Pcabscaffold_1070041690.1 Steroid BR6OX1/CYP85A1 medium borderline
Pcabscaffold_1130065930.1 Steroid BR6OX1/CYP85A1 medium borderline
Pcabscaffold_1190088190.1 Steroid BR6OX1/CYP85A1 medium borderline
Pcabscaffold_1260117860.1 Steroid BR6OX1/CYP85A1 medium borderline
Pcabscaffold_1350155050.1 Steroid BR6OX1/CYP85A1 low borderline
Pcabscaffold_1600260210.1 Steroid BR6OX1/CYP85A1 low borderline
Pcabscaffold_161_179220-17084620264280.1 Steroid BR6OX1/CYP85A1 low borderline
Pcabscaffold_161_179220-17084620265560.1 Steroid BR6OX1/CYP85A1 medium borderline
Pcabscaffold_17190293470.1 Steroid BR6OX1/CYP85A1 medium borderline
Pcabscaffold_1860336900.1 Steroid BR6OX1/CYP85A1 low borderline
Pcabscaffold_200389400.1 Steroid BR6OX1/CYP85A1 medium borderline
Pcabscaffold_20386470.1 Steroid BR6OX1/CYP85A1 medium borderline
Pcabscaffold_2330471150.1 Steroid BR6OX1/CYP85A1 medium borderline
Pcabscaffold_27040541400.1 Steroid BR6OX1/CYP85A1 medium pass
Pcabscaffold_27460547740.1 Steroid BR6OX1/CYP85A1 low borderline
Pcabscaffold_28_2104028-40092960570510.1 Steroid BR6OX1/CYP85A1 medium borderline
Pcabscaffold_29090572900.1 Steroid BR6OX1/CYP85A1 medium borderline
Pcabscaffold_30910597610.1 Steroid BR6OX1/CYP85A1 medium borderline
Pcabscaffold_31230603530.1 Steroid BR6OX1/CYP85A1 low borderline
Pcabscaffold_322850618160.1 Steroid BR6OX1/CYP85A1 medium borderline
Pcabscaffold_32380618770.1 Steroid BR6OX1/CYP85A1 medium borderline
Pcabscaffold_32740623160.1 Steroid BR6OX1/CYP85A1 medium borderline
Pcabscaffold_3430643720.1 Steroid BR6OX1/CYP85A1 medium borderline
Pcabscaffold_3600663850.1 Steroid BR6OX1/CYP85A1 low borderline
Pcabscaffold_3860692410.1 Steroid BR6OX1/CYP85A1 medium borderline
Pcabscaffold_402_19828-10181310717030.1 Steroid BR6OX1/CYP85A1 low borderline
Pcabscaffold_4070721610.1 Steroid BR6OX1/CYP85A1 medium borderline
Pcabscaffold_4800786730.1 Steroid BR6OX1/CYP85A1 low borderline
Pcabscaffold_4820787900.1 Steroid BR6OX1/CYP85A1 medium borderline
Pcabscaffold_4_900905-60197250805670.1 Steroid BR6OX1/CYP85A1 low borderline
Pcabscaffold_6760931640.1 Steroid BR6OX1/CYP85A1 medium borderline
Pcabscaffold_7080947990.1 Steroid BR6OX1/CYP85A1 medium borderline
Pcabscaffold_7830991170.1 Steroid BR6OX1/CYP85A1 medium borderline
Pcabscaffold_8601040480.1 Steroid BR6OX1/CYP85A1 medium borderline
Pcabscaffold_8671042640.1 Steroid BR6OX1/CYP85A1 low borderline
Pcabscaffold_8721046710.1 Steroid BR6OX1/CYP85A1 low borderline
Pcabscaffold_883_1-3369871050490.1 Steroid BR6OX1/CYP85A1 medium borderline
Pcabscaffold_9221074230.1 Steroid BR6OX1/CYP85A1 medium borderline
Pcabscaffold_0_1653057-107288310001780.1 Steroid BR6OX2/CYP85A2 low borderline
Pcabscaffold_0_1653057-107288310005330.1 Steroid BR6OX2/CYP85A2 low borderline
Pcabscaffold_0_1653057-107288310005380.1 Steroid BR6OX2/CYP85A2 low borderline
Pcabscaffold_0_1653057-107288310005430.1 Steroid BR6OX2/CYP85A2 low borderline
Pcabscaffold_100006460.1 Steroid BR6OX2/CYP85A2 low borderline
Pcabscaffold_100009390.1 Steroid BR6OX2/CYP85A2 low borderline
Pcabscaffold_10100017110.1 Steroid BR6OX2/CYP85A2 low borderline
Pcabscaffold_10100017120.1 Steroid BR6OX2/CYP85A2 low borderline
Pcabscaffold_10110017730.1 Steroid BR6OX2/CYP85A2 low borderline