PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

7526
Candidate Protein Records
5906
Pathway-Level Records
16043
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pcabscaffold_28_2104028-40092960570870.1 Alkaloid 7DLGT low borderline
Pcabscaffold_28_2104028-40092960570900.1 Alkaloid 7DLGT low borderline
Pcabscaffold_28_2104028-40092960570910.1 Alkaloid 7DLGT low borderline
Pcabscaffold_29470576960.1 Alkaloid 7DLGT low borderline
Pcabscaffold_29470576970.1 Alkaloid 7DLGT low borderline
Pcabscaffold_29980582910.1 Alkaloid 7DLGT low borderline
Pcabscaffold_29980582920.1 Alkaloid 7DLGT low borderline
Pcabscaffold_29980582930.1 Alkaloid 7DLGT low borderline
Pcabscaffold_29_1-33670660585820.1 Alkaloid 7DLGT high pass
Pcabscaffold_29_1-33670660585830.1 Alkaloid 7DLGT medium pass
Pcabscaffold_29_1-33670660585840.1 Alkaloid 7DLGT medium pass
Pcabscaffold_30450593420.1 Alkaloid 7DLGT medium pass
Pcabscaffold_3070595130.1 Alkaloid 7DLGT low borderline
Pcabscaffold_31310604240.1 Alkaloid 7DLGT low borderline
Pcabscaffold_31310604250.1 Alkaloid 7DLGT low borderline
Pcabscaffold_32100616600.1 Alkaloid 7DLGT medium pass
Pcabscaffold_32620621630.1 Alkaloid 7DLGT low borderline
Pcabscaffold_32970625590.1 Alkaloid 7DLGT medium pass
Pcabscaffold_33020627950.1 Alkaloid 7DLGT low borderline
Pcabscaffold_33350631200.1 Alkaloid 7DLGT low borderline
Pcabscaffold_3510653230.1 Alkaloid 7DLGT low borderline
Pcabscaffold_3510653260.1 Alkaloid 7DLGT low borderline
Pcabscaffold_3510653270.1 Alkaloid 7DLGT low borderline
Pcabscaffold_3510653280.1 Alkaloid 7DLGT medium pass
Pcabscaffold_360662350.1 Alkaloid 7DLGT low borderline
Pcabscaffold_360662690.1 Alkaloid 7DLGT medium pass
Pcabscaffold_36210665660.1 Alkaloid 7DLGT high pass
Pcabscaffold_372380676060.1 Alkaloid 7DLGT low borderline
Pcabscaffold_380683930.1 Alkaloid 7DLGT high pass
Pcabscaffold_380683940.1 Alkaloid 7DLGT low borderline
Pcabscaffold_380683960.1 Alkaloid 7DLGT low borderline
Pcabscaffold_380683980.1 Alkaloid 7DLGT medium pass
Pcabscaffold_380685000.1 Alkaloid 7DLGT low borderline
Pcabscaffold_381_1-3498320687110.1 Alkaloid 7DLGT low borderline
Pcabscaffold_381_1-3498320687120.1 Alkaloid 7DLGT low borderline
Pcabscaffold_381_1-3498320687130.1 Alkaloid 7DLGT low borderline
Pcabscaffold_381_1-3498320687140.1 Alkaloid 7DLGT low borderline
Pcabscaffold_3840690670.1 Alkaloid 7DLGT low borderline
Pcabscaffold_3840690680.1 Alkaloid 7DLGT low borderline
Pcabscaffold_3850690980.1 Alkaloid 7DLGT low borderline
Pcabscaffold_3850691010.1 Alkaloid 7DLGT low borderline
Pcabscaffold_3850691020.1 Alkaloid 7DLGT low borderline
Pcabscaffold_3850691030.1 Alkaloid 7DLGT low borderline
Pcabscaffold_39610700350.1 Alkaloid 7DLGT low borderline
Pcabscaffold_39610700360.1 Alkaloid 7DLGT medium pass
Pcabscaffold_39610700370.1 Alkaloid 7DLGT low borderline
Pcabscaffold_3990701940.1 Alkaloid 7DLGT medium pass
Pcabscaffold_3_1-26455000707110.1 Alkaloid 7DLGT low borderline
Pcabscaffold_3_1-26455000707120.1 Alkaloid 7DLGT low borderline
Pcabscaffold_3_1-26455000707130.1 Alkaloid 7DLGT low borderline