PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

7526
Candidate Protein Records
5906
Pathway-Level Records
16043
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pcabscaffold_383_1-10745670689080.1 Rosmarinic Acid C4H medium pass
Pcabscaffold_383_1-10745670689160.1 Rosmarinic Acid C4H low borderline
Pcabscaffold_383_1-10745670689170.1 Rosmarinic Acid C4H low borderline
Pcabscaffold_3860692410.1 Rosmarinic Acid C4H medium pass
Pcabscaffold_3880693610.1 Rosmarinic Acid C4H low borderline
Pcabscaffold_389_1-9159850694370.1 Rosmarinic Acid C4H low borderline
Pcabscaffold_3960699490.1 Rosmarinic Acid C4H low borderline
Pcabscaffold_3960699510.1 Rosmarinic Acid C4H low borderline
Pcabscaffold_3990702540.1 Rosmarinic Acid C4H medium pass
Pcabscaffold_39_3309495-57433670706230.1 Rosmarinic Acid C4H medium pass
Pcabscaffold_39_3309495-57433670706240.1 Rosmarinic Acid C4H low borderline
Pcabscaffold_39_3309495-57433670706250.1 Rosmarinic Acid C4H low borderline
Pcabscaffold_3_1-26455000707790.1 Rosmarinic Acid C4H medium pass
Pcabscaffold_3_1-26455000708870.1 Rosmarinic Acid C4H low borderline
Pcabscaffold_3_1-26455000709200.1 Rosmarinic Acid C4H medium pass
Pcabscaffold_402_19828-10181310716390.1 Rosmarinic Acid C4H medium pass
Pcabscaffold_402_19828-10181310716550.1 Rosmarinic Acid C4H low borderline
Pcabscaffold_402_19828-10181310717030.1 Rosmarinic Acid C4H low borderline
Pcabscaffold_4040717830.1 Rosmarinic Acid C4H medium pass
Pcabscaffold_4040717840.1 Rosmarinic Acid C4H medium pass
Pcabscaffold_4070721610.1 Rosmarinic Acid C4H low borderline
Pcabscaffold_40850722790.1 Rosmarinic Acid C4H low borderline
Pcabscaffold_40850722800.1 Rosmarinic Acid C4H medium pass
Pcabscaffold_40_1-6370950723530.1 Rosmarinic Acid C4H low borderline
Pcabscaffold_40_1-6370950723820.1 Rosmarinic Acid C4H low borderline
Pcabscaffold_40_1-6370950723830.1 Rosmarinic Acid C4H low borderline
Pcabscaffold_40_1-6370950723840.1 Rosmarinic Acid C4H low borderline
Pcabscaffold_40_1-6370950723850.1 Rosmarinic Acid C4H low borderline
Pcabscaffold_40_644123-29686580723910.1 Rosmarinic Acid C4H low borderline
Pcabscaffold_410_430000-7137580727250.1 Rosmarinic Acid C4H low borderline
Pcabscaffold_410_430000-7137580727260.1 Rosmarinic Acid C4H medium pass
Pcabscaffold_4210733930.1 Rosmarinic Acid C4H low borderline
Pcabscaffold_4220735470.1 Rosmarinic Acid C4H low borderline
Pcabscaffold_42370736230.1 Rosmarinic Acid C4H low borderline
Pcabscaffold_42730738480.1 Rosmarinic Acid C4H low borderline
Pcabscaffold_42780738530.1 Rosmarinic Acid C4H medium pass
Pcabscaffold_42780738540.1 Rosmarinic Acid C4H medium pass
Pcabscaffold_43190743940.1 Rosmarinic Acid C4H low borderline
Pcabscaffold_4320744790.1 Rosmarinic Acid C4H low borderline
Pcabscaffold_4320744800.1 Rosmarinic Acid C4H low borderline
Pcabscaffold_43240744980.1 Rosmarinic Acid C4H medium pass
Pcabscaffold_4330745130.1 Rosmarinic Acid C4H medium pass
Pcabscaffold_4350745800.1 Rosmarinic Acid C4H low borderline
Pcabscaffold_4350745810.1 Rosmarinic Acid C4H medium pass
Pcabscaffold_4350745870.1 Rosmarinic Acid C4H low borderline
Pcabscaffold_4350745920.1 Rosmarinic Acid C4H low borderline
Pcabscaffold_4360746300.1 Rosmarinic Acid C4H low borderline
Pcabscaffold_4410749840.1 Rosmarinic Acid C4H low borderline
Pcabscaffold_4430752190.1 Rosmarinic Acid C4H low borderline
Pcabscaffold_4450753030.1 Rosmarinic Acid C4H low borderline