PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status Best Target
Pcabscaffold_372590676080.1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pcabscaffold_3740677060.1 Rosmarinic Acid 4CL low borderline 4CL__00001__sp_I3PB36_CNL_PETHY
Pcabscaffold_37890680080.1 Rosmarinic Acid 4CL low borderline 4CL__00008__sp_Q42982_4CL2_ORYSJ
Pcabscaffold_38070686740.1 Rosmarinic Acid 4CL medium pass 4CL__00008__sp_Q42982_4CL2_ORYSJ
Pcabscaffold_38070686760.1 Rosmarinic Acid 4CL low borderline 4CL__00013__sp_Q84P23_4CLL9_ARATH
Pcabscaffold_383_1-10745670688550.1 Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pcabscaffold_38890693900.1 Rosmarinic Acid 4CL medium pass 4CL__00008__sp_Q42982_4CL2_ORYSJ
Pcabscaffold_39710701270.1 Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Pcabscaffold_40470718780.1 Rosmarinic Acid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Pcabscaffold_410726710.1 Rosmarinic Acid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
Pcabscaffold_41500729870.1 Rosmarinic Acid 4CL medium pass 4CL__00007__sp_Q42524_4CL1_ARATH
Pcabscaffold_41980733070.1 Rosmarinic Acid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
Pcabscaffold_434_1-5826400745440.1 Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Pcabscaffold_4390747990.1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pcabscaffold_44090749690.1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pcabscaffold_4410750290.1 Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Pcabscaffold_4480754920.1 Rosmarinic Acid 4CL low borderline 4CL__00012__sp_Q84P21_4CLL5_ARATH
Pcabscaffold_4540760170.1 Rosmarinic Acid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pcabscaffold_470775120.1 Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Pcabscaffold_48430789720.1 Rosmarinic Acid 4CL low borderline 4CL__00011__sp_Q6ZAC1_4CL5_ORYSJ
Pcabscaffold_4910794570.1 Rosmarinic Acid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Pcabscaffold_4_900905-60197250802040.1 Rosmarinic Acid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
Pcabscaffold_4_900905-60197250802450.1 Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
Pcabscaffold_510819860.1 Rosmarinic Acid 4CL medium pass 4CL__00006__sp_P17814_4CL1_ORYSJ
Pcabscaffold_5330835630.1 Rosmarinic Acid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
Pcabscaffold_5700863480.1 Rosmarinic Acid 4CL medium pass 4CL__00002__sp_I3PB37_4CL1_PETHY
Pcabscaffold_60878660.1 Rosmarinic Acid 4CL low borderline 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Pcabscaffold_60879920.1 Rosmarinic Acid 4CL low borderline 4CL__00001__sp_I3PB36_CNL_PETHY
Pcabscaffold_60881160.1 Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Pcabscaffold_610888520.1 Rosmarinic Acid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pcabscaffold_630905240.1 Rosmarinic Acid 4CL low borderline 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Pcabscaffold_640910460.1 Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pcabscaffold_6460913390.1 Rosmarinic Acid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pcabscaffold_6600924400.1 Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Pcabscaffold_6830934620.1 Rosmarinic Acid 4CL low borderline 4CL__00004__sp_O24146_4CL2_TOBAC
Pcabscaffold_690938950.1 Rosmarinic Acid 4CL medium pass 4CL__00002__sp_I3PB37_4CL1_PETHY
Pcabscaffold_6910940510.1 Rosmarinic Acid 4CL low borderline 4CL__00003__sp_M4ISH0_CCL1_HUMLU
Pcabscaffold_6910940690.1 Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
Pcabscaffold_710950020.1 Rosmarinic Acid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
Pcabscaffold_710950440.1 Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
Pcabscaffold_7480969610.1 Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Pcabscaffold_76_600587-28138150981920.1 Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Pcabscaffold_7720985950.1 Rosmarinic Acid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Pcabscaffold_7720986050.1 Rosmarinic Acid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Pcabscaffold_7750986500.1 Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pcabscaffold_7940997240.1 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Pcabscaffold_80_83762-22329471010720.1 Rosmarinic Acid 4CL medium pass 4CL__00002__sp_I3PB37_4CL1_PETHY
Pcabscaffold_8431030590.1 Rosmarinic Acid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Pcabscaffold_8431030600.1 Rosmarinic Acid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Pcabscaffold_8561033930.1 Rosmarinic Acid 4CL low borderline 4CL__00011__sp_Q6ZAC1_4CL5_ORYSJ